| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0565 |
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| Symbol | |
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| ID | 3970769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 616717 |
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| End bp | 617493 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637923682 |
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| Product | lipoprotein YaeC |
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| Protein accession | YP_530459 |
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| Protein GI | 90422089 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.692302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTAC TGACTGCGTC GCTGGTCGCG ATCGCCGCCC TGATCGGGTC GGCGCAGGCC
GAAACCATTC GCGTCGGCGT CACCGCCGGG CCGCACGCCG AGATCATCGA CGTGGTGCGC
AAGGTCGCCG CCGAGCGCGG CCTCGACATC AAGGTGGTCG AATTCACCGA CTATGTGGTG
CCGAACCAGG CGCTGGCGCA GAAGGATCTC GAGGCCAATT CGTTTCAGCA CGAGCCTTAC
CTGAAGAACC AGATCTCCAA GACTAACTGG AAGATCGTCA AGGTCGGCAA CACCATCATC
TCACCGCAGG GGGTCTATTC GACCAAATAC AAGACGCTGG CCGATCTGCC GACCGGAGCC
AAGGTCGCGA TCGCCAACGA TCCGTCGAAC GGCGCCCGCG GCTTGTTGAT TCTCGCCCAG
AACGGCCTGA TCAAGCTGAA GGACCCCAGC AACACCGCGG CCTCGGTGGC GGACATTGCG
GAAAATCCGA AAAAGCTGCG CTTCGTCGAG CTCGACGCCG CGCAATTGCC GCGCTCGCTG
CCCGACGTCG ACCTGGTGTC GATCAACAAC AACTACGCGG TGCAGGCCGG CCTCAACCCG
GTCACCGATC CGATCGCGCA CGAGACCCCC GGCGGTCCCT GGGTCAACAT CCTCGCGGTG
CGCGAGGAAG ACAAGGACAA GCCCTGGGTC AAGCAGCTGA TCGAGGCCTA TCACTCCGCG
CCGGTGCGGC AGTTCATCGA AACCCGGTTC AAGGGCACCT ATCTGGCGGC GTGGTAG
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| Protein sequence | MRLLTASLVA IAALIGSAQA ETIRVGVTAG PHAEIIDVVR KVAAERGLDI KVVEFTDYVV
PNQALAQKDL EANSFQHEPY LKNQISKTNW KIVKVGNTII SPQGVYSTKY KTLADLPTGA
KVAIANDPSN GARGLLILAQ NGLIKLKDPS NTAASVADIA ENPKKLRFVE LDAAQLPRSL
PDVDLVSINN NYAVQAGLNP VTDPIAHETP GGPWVNILAV REEDKDKPWV KQLIEAYHSA
PVRQFIETRF KGTYLAAW
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