Gene RPC_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0524 
SymbolargJ 
ID3970804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp563991 
End bp565232 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content67% 
IMG OID637923640 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_530418 
Protein GI90422048 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.297854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CCGTCTCCCC GCTCGCCCCG ACCAATGTCC CCGAATTGCC GCCGCTCGCC 
GGCGTCAAGC TCGCCACCGC CGCCGCCGGG ATCCGCTACA AGGGCCGCAC CGACGTGCTG
CTGGCGCTGC TCGACCCGGG CACCGCGGTG GCCGGGGTGT TCACCCAGTC GAAATGCCCG
TCCGCCCCGG TGGAATGGTG CCGGCTCAAT CTGAAAGGCG GCAAAGCGCG GGCGCTGGTG
GTGAATTCCG GCAACGCCAA CGCCTTCACC GGCAAGACCG GCCGCGTCGC CACCGCGCTG
ACCGCGAAAA TCGCCGCGAA AGCGATCGGC TGCAAACCCG CCGATATTTT TCTGGCCTCG
ACCGGGGTGA TCGGCGAACC GCTCGACGCC AGCAAATTCG ACGGCGTGCT CGATCAACTC
GCCGAGGCCG CTGTGCCGGG CGGCTGGATG GACGCCGCCC GCGCGATCAT GACCACCGAC
ACCTTCCCGA AGGTCGCCAC CGCCACGGTG AAGCTCGGCA AGGCCAAGGT GACGATCAAC
GGCATGGCCA AGGGCGCCGG CATGATCGCC CCCGACATGG CGACGATGCT GGCCTTCGTG
TTCACCGACG CGCCGATTGC CGCCCCCGCG CTGCAGTCGC TGCTGAAGGC CGGCGTCGCC
GACACTTTCA ACGCGGTGAC CATCGATGGC GACACCTCGA CCTCGGATAC GCTGCTGGCG
TTCGCCACGG GGGCCGCCGC CGCCAACGGC GCGCCGAAGA TTTCCAAGGC CAGCGACATC
CGGCTGAAAG CTTTCGTCAA AGCCTTCAAC GCGGTGCTGG CCAATCTCGC CGAACAGGTC
GCCCGCGACG GCGAAGGCGC GCGGAAACTG GTCGAGATCA TCGTCGACGG CGCGACCTCC
AAGGCCAGCG CCCGCAAGAT CGCGATGTCG ATCGCCAATT CGCCGCTGGT GAAGACCGCG
ATCGCCGGCG AGGATGCCAA TTGGGGCCGC GTGGTGATGG CGGTCGGCAA GGCCGGCGAA
CCCGCCGACC GCGATAAATT GTCGATTTCG TTCAACGGCA TCCGGGTCGC CAAGGCGGGC
GCGCGGGATC CCTCCTACAA CGAGGCCGAA GTCTCCAAGG CGATGAAGAG CCCGGAAATC
CAGATCAAGG TCGCGCTCGG CCTCGGCAAA GGCCGCGACC GCGTGCTGAC CTGCGACCTG
ACAAAAGAAT ACATCGCCAT CAACGGCGAC TATCGGTCGT GA
 
Protein sequence
MATAVSPLAP TNVPELPPLA GVKLATAAAG IRYKGRTDVL LALLDPGTAV AGVFTQSKCP 
SAPVEWCRLN LKGGKARALV VNSGNANAFT GKTGRVATAL TAKIAAKAIG CKPADIFLAS
TGVIGEPLDA SKFDGVLDQL AEAAVPGGWM DAARAIMTTD TFPKVATATV KLGKAKVTIN
GMAKGAGMIA PDMATMLAFV FTDAPIAAPA LQSLLKAGVA DTFNAVTIDG DTSTSDTLLA
FATGAAAANG APKISKASDI RLKAFVKAFN AVLANLAEQV ARDGEGARKL VEIIVDGATS
KASARKIAMS IANSPLVKTA IAGEDANWGR VVMAVGKAGE PADRDKLSIS FNGIRVAKAG
ARDPSYNEAE VSKAMKSPEI QIKVALGLGK GRDRVLTCDL TKEYIAINGD YRS