| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0518 |
|---|
| Symbol | |
|---|
| ID | 3970798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 560100 |
|---|
| End bp | 560978 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637923634 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_530412 |
|---|
| Protein GI | 90422042 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.239227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCGGAACCTT CACCGCCGCG ATGGTGCAAC TGCGCACCGG GCTGCTGCCG
CAGCCCAATC TCGCCGCTGC GAGCGCGCTG ATCCGCGAGG CGGCGGCGGC CGGCGCCGAC
TATGTGCTCA CCCCCGAGGT GAGCAATATG ATGCAGCCGA ACCGCGCCGC GCTGTTCGAG
CAGCTCGCGT TCCAGGACGA TGATCTGTCG CTGAAGGCCT ATCGTGAGTT GGCGAAGGCG
CTGAACATCC ATCTGCATAT CGGCTCGCTG GCGGTGAAGG CGACGCCCGA TCGCGCCGCC
AACCGTTCGT TCCTGATTGA TCCGCAAGGC GCCATTCTCG CCAGCTACGA CAAGATCCAT
ATGTTCGATA TCGATCTCGA GAACGGCGAA AGCTATCGGG AATCGGCGAA CTACCAGCCC
GGCGAGACCG CGGTGATCAG CGACCTGCCG TGGGGCCGGA TCGGGCTGAC GATCTGCTAC
GACGTGCGGT TTCCGGCGCT GTACCGCGCG CTGGCCGACG CCGGCGCGGC CTTCATCTCG
GTGCCGGCGG CGTTCACCAA GACCACCGGC GAGGCGCATT GGCATACGCT GCTGCGCGCC
CGCGCCATCG AGAACGGCTG CTTCATCTTC GCCGCCGCGC AAGGCGGGCT GCACGACAAC
GGCCGCTCCA CCTTCGGCCA TTCGCTGATC ATCGATCCGT GGGGCGTGGT GCTGGCGGAA
GGCGGCACCG AGCCCGGCTT CATCATCACC GAGATCGACC CCGGCAAGGT CACCAAGGCG
CGCAGCGCGA TCCCGTCGTT GCAGCACGGC CGCCGCTTCG GCCTCGCCGA TCCGAAGACC
AATCCGGAGC ATCTGCACCT GGTGCGGGGC ACGGTATGA
|
|---|
| Protein sequence | MSAAGTFTAA MVQLRTGLLP QPNLAAASAL IREAAAAGAD YVLTPEVSNM MQPNRAALFE
QLAFQDDDLS LKAYRELAKA LNIHLHIGSL AVKATPDRAA NRSFLIDPQG AILASYDKIH
MFDIDLENGE SYRESANYQP GETAVISDLP WGRIGLTICY DVRFPALYRA LADAGAAFIS
VPAAFTKTTG EAHWHTLLRA RAIENGCFIF AAAQGGLHDN GRSTFGHSLI IDPWGVVLAE
GGTEPGFIIT EIDPGKVTKA RSAIPSLQHG RRFGLADPKT NPEHLHLVRG TV
|
|---|
| |