Gene RPC_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0516 
Symbol 
ID3970796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp558448 
End bp559347 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID637923632 
Producthypothetical protein 
Protein accessionYP_530410 
Protein GI90422040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.23232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCA TCGCCGCGCT CTGGATTCCC TTCACGTTGG TGGCCGCGCT CGGCCAGGTG 
GCGCGCAATG CGATGCAGCG CCAGCTCACC GGGCCGCTCG GTACCTGGGG CGCCACCAAT
ATCCGCTTCC TGTTCGGCTT TCCGTTCTCG CTCGTTTTCT TCGCGGTGGT GATCGTCGCC
ACCGGCGACG CGGTGCCGTG GCCGACCGCG GCGTTCTGGC CATGGCTGCT GCTCGGCGCG
CTGAGCCAGA TCCTCGGCAC CGGCTTGATG CTGGCGGCGA TGAACGACCG CTCCTTCGTG
GTGACGACTG CGTATCTGAA AACCGAGGCG ATCCAGACCG CGATCTTCGG CTTCGTGTTT
TTGGGCGATC ACCTGACCTG GCTGAAGGTC ACCGCGATCC TGATCGCCAC GCTCGGCGTG
GTGATCACCG CGCTGCGGCC GGGGGGTGAT AAGAGCTTCA CCGATCTGAA GCCGACGCTG
CAGGGGCTGG TGGCGGCGGC GGCGTTCGCG CTGTCGGCGG TGGGGTTCCG CGGCGCCATC
ATCGTGGTGC CGGACGTCTC CTTCGTCACC GCGGCGTCGT ATACCCTGGT GGCCGCATTG
GGCGTGCAGA CGCTGGTGCT GACGATCTAT CTGCTGGCCC GCGCGCCGAA AGTGCTGCGC
GACATTCTCC AGCTGTGGAA GCCGTCGATG CTGGCCGGCT TCACCGGCGC GCTGGCCTCG
CAGTTCTGGT TTCTCGCCTT CGCGCTGACC GCGGCGGCGA ACGTGCGCAC GCTGGCGCTG
GTCGAGGTGC TGTTCGCGCA GGCCGTGGCG TATTTTTCGT TCAAGCAGCC GCTGCTGCCG
CGGGAATTGT TCGGCATCGC CTTGATCGTG GTCGGCGTTG CGCTGCTGAT CGCCGGCTGA
 
Protein sequence
MFSIAALWIP FTLVAALGQV ARNAMQRQLT GPLGTWGATN IRFLFGFPFS LVFFAVVIVA 
TGDAVPWPTA AFWPWLLLGA LSQILGTGLM LAAMNDRSFV VTTAYLKTEA IQTAIFGFVF
LGDHLTWLKV TAILIATLGV VITALRPGGD KSFTDLKPTL QGLVAAAAFA LSAVGFRGAI
IVVPDVSFVT AASYTLVAAL GVQTLVLTIY LLARAPKVLR DILQLWKPSM LAGFTGALAS
QFWFLAFALT AAANVRTLAL VEVLFAQAVA YFSFKQPLLP RELFGIALIV VGVALLIAG