Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0504 |
Symbol | |
ID | 3970266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 543843 |
End bp | 545021 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923620 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_530398 |
Protein GI | 90422028 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0234538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG ATGTCGTCAT CGTCAGCGCC GCTCGTACCG CTGTCGGAAG TTTCAACGGC GCCTTTGCTA CTTTGCCCGC GCACGACCTC GGTGCGGTGG TGATCCGGGC CGCGCTGGAG CGCGCCGGTC TGGAGCCCGG CCGGGTTTCC GAAGTCATCA TGGGCCAGAT CCTCACCGCG GCGCAGGGCC AGAACCCGGC GCGCCAGGCC TCGATCGCCG CCGGCATTCC GGTGGAAAGC CCGGCCTGGG GCATCAATCA GCTGTGCGGC TCCGGCCTGC GCACCGTGGC GCTGGGCTAT CAGGCGCTGC TCAACGGCGA TTCCGATATC GTCGTCGCCG GCGGTCAGGA ATCCATGAGC ATGGCGCCGC ACGCGCAATA TCTGCGCGGC GGGGTGAAGA TGGGCGCGGT GGAATTCGTC GATACCATGC TGAAGGATGG TCTGTGGGAT GCCTTCAACG GCTATCACAT GGGCAACACC GCTGAGAACG TCGCCAAGCA GTATCAGATC ACCCGGCAGC AGCAGGATGA GTTCGCGGTG GCCTCGCAGA ACAAGGCCGA GGCGGCGCAG AAGGCCGGCC GCTTCAACGA CGAGATCGTT CCGGTCACGG TGAAAAACCG CAAGGGCGAC ATCATCGTCG ACACCGACGA GTTTCCGCGT CACGGCGCGA CCATCGAGGC GATGGCGAAG CTGAAGCCGG CGTTCGAAAA GGACGGCACG GTGACGGCGG GCTCGGCCTC CGGGATCAAC GACGGCGCCG CCGCGGTGGT GCTGATGACC GCCAAGCAGG CCGCCAAGGA AGGCAAGACG CCGCTGGCGC GCATCGTCTC CTGGGGCCAG GCCGGCGTCG ATCCGAAGAT CATGGGCACC GGGCCGATCC CGGCGTCGCG CGCGGCGCTG AAGAAGGCCG GCTGGTCGAT CGGCGATCTC GATCTGATCG AAGCCAACGA GGCCTTCGCG GCGCAGGCCT GCGCGGTCAA CAAGGACCTC GGCTGGGATA CTTCTAAAGT GAACGTCAAC GGCGGCGCGA TCGCGATCGG CCATCCGGTC GGCGCCTCCG GCGCGCGCAT CCTGGTGACG TTGCTGCACG AAATGCAGAA GCGCGATGCC AAGAAAGGCC TTGCTACGCT GTGTATCGGC GGCGGCATGG GTATTGCGAT GTGCCTCGCG CGGGATTGA
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Protein sequence | MSDDVVIVSA ARTAVGSFNG AFATLPAHDL GAVVIRAALE RAGLEPGRVS EVIMGQILTA AQGQNPARQA SIAAGIPVES PAWGINQLCG SGLRTVALGY QALLNGDSDI VVAGGQESMS MAPHAQYLRG GVKMGAVEFV DTMLKDGLWD AFNGYHMGNT AENVAKQYQI TRQQQDEFAV ASQNKAEAAQ KAGRFNDEIV PVTVKNRKGD IIVDTDEFPR HGATIEAMAK LKPAFEKDGT VTAGSASGIN DGAAAVVLMT AKQAAKEGKT PLARIVSWGQ AGVDPKIMGT GPIPASRAAL KKAGWSIGDL DLIEANEAFA AQACAVNKDL GWDTSKVNVN GGAIAIGHPV GASGARILVT LLHEMQKRDA KKGLATLCIG GGMGIAMCLA RD
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