| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0503 |
|---|
| Symbol | |
|---|
| ID | 3970265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 542915 |
|---|
| End bp | 543553 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637923619 |
|---|
| Product | polyhydroxyalkanoate synthesis repressor PhaR |
|---|
| Protein accession | YP_530397 |
|---|
| Protein GI | 90422027 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0209357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAT CGAATCTGCC GACGACGATC AAGAAATATG CAAACCGGCG GCTCTACAAC
ACCGGAACCA GTACTTACGT GACGCTCGAG GACCTCGCCG CGATGGTGAA GGACGGCGAG
GATTTCCTGG TTTTCGACGC CAAATCCGGC GACGACATCA CCCGCTCGGT GCTGGCGCAG
ATCATTTTCG AACAAGAGAA CAAGGCCGGT CAGAACCTGC TACCGACCAC CTTCCTGCGC
CAACTGATCA GGTTCTACGG CGACAGCATG CAGATGGTGG TGCCGCGCTA TCTGGAGCAG
TCGATCGACA CGCTGACCCG CGAACAGGAG AAATTTCGCA ACCAGCTGAC CTCGACCTTC
AGCGTCGGAC CGTTCGCCCC GCTGGAAGAG CACGTCCGCC GCAACATGGA ATTGTTCGAG
CGCACCTTCT CGATGTTCAA GCCGTTCGTG CCGCCGCATC CGTCCAGTCA GCCGGCGCCG
GCGCCCGAGC CGGAAGCGCC GCCGGCGGAT CCCGCGGTCG ACGCCGGCAA TATCGAGGAC
CTGCGTCGCC AGATGAAGGA GATGCAGGAG CGGCTCGACC GCATGGCGGC GGAGCCGAAG
CCGTTGGCCG AGGAGCCGAA GAAGGACGAG GGGGCGTAG
|
|---|
| Protein sequence | MAKSNLPTTI KKYANRRLYN TGTSTYVTLE DLAAMVKDGE DFLVFDAKSG DDITRSVLAQ
IIFEQENKAG QNLLPTTFLR QLIRFYGDSM QMVVPRYLEQ SIDTLTREQE KFRNQLTSTF
SVGPFAPLEE HVRRNMELFE RTFSMFKPFV PPHPSSQPAP APEPEAPPAD PAVDAGNIED
LRRQMKEMQE RLDRMAAEPK PLAEEPKKDE GA
|
|---|
| |