| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0484 |
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| Symbol | |
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| ID | 3970246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 522329 |
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| End bp | 524476 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923600 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_530378 |
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| Protein GI | 90422008 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.102378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATA TTCATTCAGT CGAAATCGAT TGGGGTGGGC GTCCGCTCAA GCTTGAGACC
GGCAAGATCG CCCGTCAGGC TGACGGCGCC GTCGTCGCCA CTTACGGCGA GACCGTTGTG
CTCGCCACCG TGGTGGCCGC CAAGTCCGCC AAGGAAGGCG TCGACTTCCT GCCGCTGACC
GTCGACTACA TCGAAAAGAC CTACGCCGCC GGCCGCATTC CCGGCGGTTA CTTCAAGCGC
GAAGGCCGTC CGACCGAAAA GGAGACGCTG GTCTCCCGCC TGATCGACCG CCCGATCCGT
CCGCTGTTCG TCGACGGCTG GCGCAACGAG ACCCAGGTGA TCGTCACCGT GCTGTCCCAC
GACATGGAGA ACGATCCGGA CATTCTCGCG CTGGTCGCCT CCTCGGCCGC GCTGACCCTG
TCCGGCGCGC CGTTCAAGGG CCCGATCGGC GCCGCCCGCG TCGGCTTCAT CAACGACGAA
TACGTGCTCA ACCCGACGCT CGATGAAATG GTCGACACTC AGCTCGACCT GGTCGTCGCC
GGCACCGCCG ACGCCGTCTT GATGGTGGAA TCCGAAGCCA AGGAACTCAA CGAAGACATC
ATGCTCGGCG CGGTGATGTT CGGTCACCGG CACTTCCAGC CGGTGGTGCA GGCGATCATC
GAGCTCGCCG AGAAGGCCGC CAAGGAGCCG CGCGAAGTCG CGGTGGTCGA CGAGAGCGTT
CTTGAGAAGG AAATTCTCGG CCTGATCGAG CCCGAGCTGC GCGCCGCCTA CGCCATTCCG
GTCAAGCAGG ATCGCTACGC CGCGGTCGGC AAGGCCAAGG AAAAGGTGAT GGCGCACTAC
TTCCCGGAAG GCCAGGAGCC GCAATACGAC AAGCTGCGGA TCGCCGGCGT GTTCAAGGAA
TTGGAAGCCA AGATCGTTCG CTGGAACATC CTCGACACCG GCAAGCGCAT CGACGGCCGT
GATAGCAAGA CCGTGCGCAA CATCGTCGCC CAGGTCGGCG TGCTGCCGCG CGCCCATGGT
TCGGCGCTGT TCACCCGCGG CGAAACCCAG GCGCTGGTGG TCACCACGCT CGGCACCGGC
GAGGACGAGC AGTACATCGA CTCGCTGTCC GGCACCTACA AAGAGACCTT CCTGCTGCAC
TACAACTTTC CTCCCTACTC GGTCGGCGAG ACCGGCCGCA TGGGCGGCAC CAAGCGTCGC
GAAATCGGCC ACGGCAAGCT CGCCTGGCGC GCGATCCATC CGGTGCTGCC GCCGCATCAC
GAGTTCCCCT ACACGCTGCG CGTGGTCTCC GAGATCACCG AGTCGAACGG CTCGTCCTCG
ATGGCCTCGG TGTGCGGCGC CTCTCTCGCG CTGATGGACG CCGGCGTGCC GTTGAAGCGG
CCGACCGCGG GCATCGCGAT GGGTCTGATC CTGGAAGGCG AGCGCTTCGC GGTGCTCTCC
GACATCCTCG GCGACGAGGA TCATCTCGGC GACATGGACT TCAAGGTGGC CGGCACCGAG
CAGGGCATCA CCTCGCTGCA GATGGACATC AAGATCGCCG GCATCACCGA GGAGATCATG
AAGGTCGCGC TCGGCCAGGC CAAGGACGGA CGCATCCACA TTCTAGGTGA GATGTCGAAG
GCTCTGACCA ACGCCCGCGC CGAACTCGGC GAATACGCGC CGCGCATCGA GACCTTCAAG
ATCGCCACCG ACAAGATCCG TGAAGTGATC GGCACCGGCG GCAAGGTGAT CCGCGAGATC
GTCGAAAAGA CCGGCGCCAA GGTCAACATC GACGACGACG GCACCGTCAA GGTCGCCTCC
AGCGACGGCG AATCGATCAA GGCCGCGATC AAGTGGATCA AGTCGATCGC GTCGGATCCG
GAACTCAACG CGATCTATGA TGGCACCGTC GTCAAGGTCA TGGAGTTCGG CGCCTTCGTG
AACTTCTTCG GCGCCAAGGA CGGCCTCGTC CATATCAGCC AGCTCGCTGC CGGCCGGGTG
CAGAAGACCT CCGACGTCGT CAAGGAAGGC GACAAGGTCA AGGTCAAGCT GTTGGGCTTC
GACGACCGCG GCAAGACCCG GTTGTCGATG AAGGTGGTCG ATCAGGAAAC CGGCGAAGAC
CTCGAGGCCA AGCAGAAGGC CGCCGAGGGC GCCACCGCCG CGGAGTAA
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| Protein sequence | MFNIHSVEID WGGRPLKLET GKIARQADGA VVATYGETVV LATVVAAKSA KEGVDFLPLT
VDYIEKTYAA GRIPGGYFKR EGRPTEKETL VSRLIDRPIR PLFVDGWRNE TQVIVTVLSH
DMENDPDILA LVASSAALTL SGAPFKGPIG AARVGFINDE YVLNPTLDEM VDTQLDLVVA
GTADAVLMVE SEAKELNEDI MLGAVMFGHR HFQPVVQAII ELAEKAAKEP REVAVVDESV
LEKEILGLIE PELRAAYAIP VKQDRYAAVG KAKEKVMAHY FPEGQEPQYD KLRIAGVFKE
LEAKIVRWNI LDTGKRIDGR DSKTVRNIVA QVGVLPRAHG SALFTRGETQ ALVVTTLGTG
EDEQYIDSLS GTYKETFLLH YNFPPYSVGE TGRMGGTKRR EIGHGKLAWR AIHPVLPPHH
EFPYTLRVVS EITESNGSSS MASVCGASLA LMDAGVPLKR PTAGIAMGLI LEGERFAVLS
DILGDEDHLG DMDFKVAGTE QGITSLQMDI KIAGITEEIM KVALGQAKDG RIHILGEMSK
ALTNARAELG EYAPRIETFK IATDKIREVI GTGGKVIREI VEKTGAKVNI DDDGTVKVAS
SDGESIKAAI KWIKSIASDP ELNAIYDGTV VKVMEFGAFV NFFGAKDGLV HISQLAAGRV
QKTSDVVKEG DKVKVKLLGF DDRGKTRLSM KVVDQETGED LEAKQKAAEG ATAAE
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