Gene RPC_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0475 
Symbol 
ID3970237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp512279 
End bp512671 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID637923591 
Producthypothetical protein 
Protein accessionYP_530369 
Protein GI90421999 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.882422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.354982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGA ACCTGCTTGG CGATACCTAC CGCGACTACA TCGCCTGCCT CAATCAGCAG 
GACTGGGCGA AGCTCGACTA CTTCGTCGAT CACGAGGTGA TCCACAATGG TCAGCCGATC
GGGTTGCGCG GTTACCTTGA GATGCTGCAG GGAAACTATC GGGAGATTCC CGATCTGCTA
TTCAAGATAG AGCTCTTGAT CTGCGATCCG CCCCGCGTGG CGAGCCGGCT CCGCTTCGAC
TGTGCACCGC GAGGAGAATT CCTCGGTGTT GCGGTCAACG GACGGCGCGT CAGCTTCGCC
GAAAACGTGT TCTATGAATT TGCCGAAGCC AAGATCGTGC GGGTCTGGTC GGTGATCGAC
AAGGCCGCGA TCGAAGCCCA GCTTGCCGGC TGA
 
Protein sequence
MTPNLLGDTY RDYIACLNQQ DWAKLDYFVD HEVIHNGQPI GLRGYLEMLQ GNYREIPDLL 
FKIELLICDP PRVASRLRFD CAPRGEFLGV AVNGRRVSFA ENVFYEFAEA KIVRVWSVID
KAAIEAQLAG