Gene RPC_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0459 
Symbol 
ID3970221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp496181 
End bp497230 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content62% 
IMG OID637923575 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_530353 
Protein GI90421983 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG AACGGGTTTT CTCCGGCGTG CAGCCGACCG GCAATCTCCA TCTCGGCAAC 
TACCTCGGCG CGATCGTCAA TTTCGTCAAA CTGCAGGACA CCCACAACTG CATCTATTGC
GTGGTCGATC TGCACGCCAT GACCATGCCG ATTTCGGTCT GGGGCGGCCC GGACGAACTG
CGACGCCATA CCCGCGAGGT GACCTCGGCC TTCATCGCCT CCGGCATCGA CCCCAAGAAG
CAGATCATCT TCAACCAGAG CCAGGTCTCC GAACACGCCG AACTGGCCTG GGTGTTCAAC
TGCGTGGCCC GTCTCGGCTG GCTCAACCGG ATGATCCAGT TCAAGGAAAA GGCCGGCAAG
GATCGCGAGA ACGCCTCGGT TGGACTTTAT GATTATCCGG TGCTGATGGC GTCCGACATT
CTGGTGTATC GCGCCACCCA TGTGCCGGTC GGCGAGGACC AGAAGCAGCA CATGGAGCTC
ACGCGCGATA TCGCGCAGAA GTTCAACAAC GATTTTTCCG CCTCGATCGC CGCGCAAGGC
TATGGCGAGG CGTATTTCCC GCTGCCGGAG CCGGTGATCA CCGGCCCGGC GACGCGGGTG
ATGAGCCTGC GCGACGGCAC CAAGAAGATG TCGAAGTCGG ACCCGTCGGA TTATTCGCGG
ATCAACCTCA CCGACGACGC CGACGCCATC GCGCAAAAGA TCCGCAAGGC CAAGACCGAT
CCGGAGCCGT TGCCGAGCGA GGAAAAGGGC CTCGAGCCGC GCCCCGAGGC CGACAATCTG
GTCGGCATCT ATGCGGCTTT GGCCGGCAAG CCGAAATCCG AGGTGCTGGC CGAATTCGGC
GGCGCGCAGT TCTCCGGCTT CAAGTCGAAT CTGGTGGATC TGGCGGTGTC GAAACTGGCC
CCGCTCGCCG CCGAGATGAA GCGGCTGACC GCCGATACGA CTTACGTCGA TCAGGTATTG
GCCGACGGCG CCGACCGCGC CCGCGTCATC GCCGCCGAGA CCATGAATGC GGTGAAGGAC
ATCGTCGGCC TGGTGCGCAA AAAGGGCTGA
 
Protein sequence
MTIERVFSGV QPTGNLHLGN YLGAIVNFVK LQDTHNCIYC VVDLHAMTMP ISVWGGPDEL 
RRHTREVTSA FIASGIDPKK QIIFNQSQVS EHAELAWVFN CVARLGWLNR MIQFKEKAGK
DRENASVGLY DYPVLMASDI LVYRATHVPV GEDQKQHMEL TRDIAQKFNN DFSASIAAQG
YGEAYFPLPE PVITGPATRV MSLRDGTKKM SKSDPSDYSR INLTDDADAI AQKIRKAKTD
PEPLPSEEKG LEPRPEADNL VGIYAALAGK PKSEVLAEFG GAQFSGFKSN LVDLAVSKLA
PLAAEMKRLT ADTTYVDQVL ADGADRARVI AAETMNAVKD IVGLVRKKG