Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0443 |
Symbol | |
ID | 3970205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 477481 |
End bp | 478911 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637923559 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_530337 |
Protein GI | 90421967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCC GCGAGTTCCT GGCGGCCTCG GCGGCCTTGG CGCTGACGCC GGCGTTGCGC TGGCCGGCTT TCGCCGCACC GCTGCCGCGC GAGGCCGACG TGGTGGTGAT CGGCGCCGGC GCCGCCGGCA TCGCGGCGGC CCGGCGAATC ATCGCCGCGG GCCGCAAGGT GATCGTGATC GAGGCCGGCC GGCAGGTCGG CGGCCGCTGC CTGACCGATA CGACCAGCTT CGAGGTTCCG TTCGATCGCG GCGCGCGCTG GCTGCACAAT CCGGAGACCA ACCCGCTGGT CAAGCTGGCG CGCGGCGCAG GGCTCGACGT CGCGCCGGCG CCGCCCGGGC AGAAGCTGCG GATCGGCCGC CGCAACGCTC GCCCCGGCGA GACCGAGGAT CTGCTGGCGA GTCTGGTGCG CGCCAACCGC GCCATCGACG ACGCCGCGCG CAAGGCCGAT CTGTCCTGCG CGGCGGCGCT GCCGAAGGAT CTCGGCGACT GGGCCGGGAC GGTGGAATTC TTGCTCGGGC CCTACGCCAC CGGCAAGGAT CTCAAGGACC TGTCGGCGCT CGATCAGTTC CGCGCCCAGG ATCGCAACGC CATGGTGGCC TGCCGCCAGG GACTCGGCAC CATGATCGGC AAGCTCGGCG AGGGTCTGCC CGTCGCGCTG GCGACGCCGG CGACGCGAAT CACCTGGGGC GGCCGCGACG TCGGCGTCGA AACCCCAGCC GGGCGGATCA CGGCGCGCGC CGTGATCGTC ACGGTGTCGA GCAACGTGCT GGCGTCCGGC GCCATCAAGT TCGCCCCGGA GCTGCCGAAG CGGCAGCTCG ACGCCGCCGC CAAGCTGACG CTCGGCAGCT ACGATCACGT CGCATTGCTG TTGTCCGGCA ATCCGCTGGG ATTGCCCAAG GACGAGATCA TGATCGAGCA GTCGAGCGAC GCCCGCACTG CCTTCCTGGT CGCCAATATG GCCGGCAGCT CGCTGTGCTC GGTCGACGTC GCGGGCGCGT TCGGCCGTGA CCTCGCGGCG CAGGGCGAGG CGGCGATGAT CGATTTCGCC AAGGAATGGC TCGGCAAGCT GTTCGGCAGC GACGCCGTCG CGGAGGTCCA AGGCGCCAGC GCGACGCGCT GGAATGCGCA GCCCTTGGTG CAAGGCGCGA TGTCGGCGGC GCTGCCCGGC GGGCAGTTCG CAAGGCGGGT GCTGGCCGAG CCGATCGGCA ACCTGTTTCT GGCCGGCGAA GCCAGCCATG AGACGCTGTG GGGCACCGTG GACGGCGCCT GGGACTCAGG CGAACGCGCC GCCGACGCCG CGTTGAAGCG GATCGGCAGC CTGAAGAGCG ACACGCCGGC GCAGTCTTCG CCGCGCAAGC CGAAGCAACG CCGCGAGCGG GGCGTCTCCG GCGCGAGTGC CGGAGACCTC GGCTGGCCGG GGAGGCGGTA G
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Protein sequence | MSRREFLAAS AALALTPALR WPAFAAPLPR EADVVVIGAG AAGIAAARRI IAAGRKVIVI EAGRQVGGRC LTDTTSFEVP FDRGARWLHN PETNPLVKLA RGAGLDVAPA PPGQKLRIGR RNARPGETED LLASLVRANR AIDDAARKAD LSCAAALPKD LGDWAGTVEF LLGPYATGKD LKDLSALDQF RAQDRNAMVA CRQGLGTMIG KLGEGLPVAL ATPATRITWG GRDVGVETPA GRITARAVIV TVSSNVLASG AIKFAPELPK RQLDAAAKLT LGSYDHVALL LSGNPLGLPK DEIMIEQSSD ARTAFLVANM AGSSLCSVDV AGAFGRDLAA QGEAAMIDFA KEWLGKLFGS DAVAEVQGAS ATRWNAQPLV QGAMSAALPG GQFARRVLAE PIGNLFLAGE ASHETLWGTV DGAWDSGERA ADAALKRIGS LKSDTPAQSS PRKPKQRRER GVSGASAGDL GWPGRR
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