| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0419 |
|---|
| Symbol | |
|---|
| ID | 3970814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 450451 |
|---|
| End bp | 451065 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923534 |
|---|
| Product | 3'-5' exonuclease |
|---|
| Protein accession | YP_530313 |
|---|
| Protein GI | 90421943 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0349] Ribonuclease D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCC GCCTGCATCG CGGCGATCTG CCAGACTTGT CGCGCTACAC CGATTCGGTG
GCGATCGACA CCGAAACCAT GGGGCTGAAC CCGCATCGCG ACCGGCTCTG CGTGGTGCAG
CTCTCCAACG GCGACGGCAG CGCCGACGTG GTGCAGATCC CGGTCGGCCA CAGCGACGCG
CCTAACCTGA AGAAACTGCT GGGCGACCCG GCGATCACCA AGATCTTCCA TTTCGCGCGG
TTCGATCTCG CGGCGCTGTA CAACGCGCTC GGGGTGATGC CGCAGCCGGT GTATTGCACC
AAGATCGCCT CGCGGCTGAC CCGCACCTAT ACGGATCGGC ACGGCCTGAA AGATCTGGTG
CGCGAAGTGC TCGGCGTCGA TTTGTCGAAG CAGCAGCAAT CCAGCGACTG GGGCGCGCAA
AGTCTCAGCG ACGCGCAATT GGCCTACGCC GCCTCCGACG TGCTGCATTT GCACGGCCTG
CGCACAAGGC TCGACGCCAT GCTGGCGCGT GAAGGCCGCA CCGAATTGGC TCAGGCGTGT
TTCGATTTCC TGCCGACCCG CGCCAAACTC GACCTCTCAG GCTGGGCGGA ACAGGATATT
TTCGCGCATT CCTGA
|
|---|
| Protein sequence | MTIRLHRGDL PDLSRYTDSV AIDTETMGLN PHRDRLCVVQ LSNGDGSADV VQIPVGHSDA
PNLKKLLGDP AITKIFHFAR FDLAALYNAL GVMPQPVYCT KIASRLTRTY TDRHGLKDLV
REVLGVDLSK QQQSSDWGAQ SLSDAQLAYA ASDVLHLHGL RTRLDAMLAR EGRTELAQAC
FDFLPTRAKL DLSGWAEQDI FAHS
|
|---|
| |