Gene RPC_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0418 
Symbol 
ID3970813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp449539 
End bp450273 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content65% 
IMG OID637923533 
Producthypothetical protein 
Protein accessionYP_530312 
Protein GI90421942 
COG category[S] Function unknown 
COG ID[COG5375] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAT CCTATCAAGC CGGAATGGAG ACGCGCTTTG CCGCCGCTGC GCGTCACAGC 
CGGCTGGTGC GGTTGTTGCG GGTCGCGGTG CCTCTGGCGG TGCTGCTGGC AATGGCCGCG
ATCGTCGCGG TTTCGGTGTT CAACCCGTTC CGTTTCTTGG CGAAGCTGCC GGTGGACATG
GGCAATCTGG TGGTGTCCGG CACCAAGATC ACGATGGAAT CGCCGCATTT GTCGGGATTC
TCGCCGGACC AACGGCCCTA TGAATTGTGG GCCAAGACCG CGACCCAGGA CCTCACCACG
CCCGACCATG TCGATCTGGC GACGTTGCGG GCCAAGCTTT TGACCCAGGA CCAGGCGACC
GTCACGGTCG ATGCGCGCCA GGGGCTGTTC GACACCAAGG CGCAGCTGCT CGACTTGCGA
AAGGACGTCT ACTTGCTGAG TTCGACCGGC TACGAGGCCT GGATGACCCG GGCGTTTATC
GATATCGGCA AGGGCACCGT GGTGTCGGAC GAGCCGGTCG ACGTGAAATG GCAGGGCGGA
ACGCTGCGCG GACAACGCAT GCGGGTCACC GAAAAGGGCG AGATCGTCCG CTTCGAAGGC
GGCGTGGTGA TGAATCTGGA CGGCGTGCAA CCCGCCCCGG CCGAACCACC CGCCCCGCAG
CCGTCCGCGC CAAGGGCCGA AACCGCGCCG GCCAGCCCGC CCCGGGCTGT CTCCGGCAAA
GCCAATGTGA AATGA
 
Protein sequence
MTSSYQAGME TRFAAAARHS RLVRLLRVAV PLAVLLAMAA IVAVSVFNPF RFLAKLPVDM 
GNLVVSGTKI TMESPHLSGF SPDQRPYELW AKTATQDLTT PDHVDLATLR AKLLTQDQAT
VTVDARQGLF DTKAQLLDLR KDVYLLSSTG YEAWMTRAFI DIGKGTVVSD EPVDVKWQGG
TLRGQRMRVT EKGEIVRFEG GVVMNLDGVQ PAPAEPPAPQ PSAPRAETAP ASPPRAVSGK
ANVK