| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0400 |
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| Symbol | |
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| ID | 3970851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 433640 |
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| End bp | 435043 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637923514 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_530294 |
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| Protein GI | 90421924 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGCGCG CAAGCCGTTC GCATCCGGCC GCGCCGGCGC AGAGGAACAC AATCTTGACC
CATTCAGCTC ACCCCTCCGG CCAGCCGAGC CCACTTCAAG CGCGCAAGTC CGCGTCCCTG
ACCGGCCGGG TGCGGGTGCC GGGCGACAAA TCGATCTCGC ATCGGGCGCT GATTCTCGGC
GCGCTGGCGG TCGGCGAAAC CCGGATCAGC GGGCTGCTCG AGGGCGAGGA CGTGCTCAAC
ACCGCCAAAG CGATGCGGGC GCTCGGCGCT AGCGTCGAGC GCACCGGCGA TTTTGCCTGG
CGGATCCACG GCGTCGGCGT CGGCGGTTTC GCGCAGCCGG CCGCGGCGCT CGATTTCGGC
AATTCCGGCA CCGGCTGCCG GCTGGTGATG GGCGCGGTCG CCGGCTGTCC GATCACCGCC
ACCTTCGACG GCGACGCCTC GCTGCGCTCG CGGCCGATGC GGCGGATCGT CGATCCATTG
GAACTGATGG GCGCACGGGT CATCGACAGC CGCGAGGGCG GCCGGCTGCC GCTGACCCTG
CAGGGCGCCC GCGATCCGCT GCCGATCCTC TACCGCACCC CGGTGGCCTC GGCGCAGATC
AAGTCCGCGG TGCTGCTGGC GGGGCTGGCG GCGCCCGGAA TCACCACGGT GATCGAGCAG
GAGGCCAGCC GCGACCACAC CGAACTGATG CTGAGCCATT TCGGCGCGCA GATCGTCAGC
GAGCCCGAAG GCGCGCACGG CCGCAAGATC TCGCTGACCG GGCAGCCCGA GCTGCGCGGG
GCGCCGGTGG TGGTGCCGGC CGACCCGTCC TCGGCGGCGT TTCCGATCGT GGCGGCACTG
ATCGTGCCGG GCTCCGACAT CGTGCTGACC GAGGTGATGA CCAATCCGCT GCGCACCGGG
CTGTTCAAGA CCTTGCGCGA AATGGGCGGC TCGATCGAGG AGAGCGAGGT GCGCGGCGAC
GCCGGCGAGC CGATGGCCCA GTTCCGGGTG CGCGCCTCGC AGCTCAAGGG CGTCGAAGTT
CCGCCGGAGC GGGCGCCGTC GATGATTGAC GAATATCTGG TGCTGGCGGT GGCCGCCGCC
TTCGCCGAGG GCACCACGCG GATGCGGGGC TTGAAGGAAT TGCGGGTCAA GGAGAGCGAC
CGGCTGGAAG CCACCGCGGC GATGCTGCGG CTCAACGGCG TTTCGGTCGA GATCGACGGC
GACGATCTGA TCGTCGAGGG CCGCGGCCAC GTGCCGGGCG GCGGGCTCGT TGCCACCGAA
ATGGATCACC GCATCGCGAT GTCGGCGCTG GTGATGGGGC TCGCCGCCGA CCAGCCGGTG
ACCATCGACG ATACCGGCTT CATCGCGACG TCCTTCCCGG ACTTCATCCC GATGATGCGC
CGGCTCGGCG CGGAGTTCGG CTGA
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| Protein sequence | MMRASRSHPA APAQRNTILT HSAHPSGQPS PLQARKSASL TGRVRVPGDK SISHRALILG
ALAVGETRIS GLLEGEDVLN TAKAMRALGA SVERTGDFAW RIHGVGVGGF AQPAAALDFG
NSGTGCRLVM GAVAGCPITA TFDGDASLRS RPMRRIVDPL ELMGARVIDS REGGRLPLTL
QGARDPLPIL YRTPVASAQI KSAVLLAGLA APGITTVIEQ EASRDHTELM LSHFGAQIVS
EPEGAHGRKI SLTGQPELRG APVVVPADPS SAAFPIVAAL IVPGSDIVLT EVMTNPLRTG
LFKTLREMGG SIEESEVRGD AGEPMAQFRV RASQLKGVEV PPERAPSMID EYLVLAVAAA
FAEGTTRMRG LKELRVKESD RLEATAAMLR LNGVSVEIDG DDLIVEGRGH VPGGGLVATE
MDHRIAMSAL VMGLAADQPV TIDDTGFIAT SFPDFIPMMR RLGAEFG
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