Gene RPC_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0398 
Symbolcmk 
ID3970887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp431949 
End bp432587 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID637923512 
Productcytidylate kinase 
Protein accessionYP_530292 
Protein GI90421922 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCG CCATCGACGG ACCGGCCGCC TCCGGCAAGG GCACGCTCGG CAAGCGGCTC 
GCGGCGCATT ACGGCTACCG TCATTTAGAT ACCGGCGTGA TCTACCGTGC GGTCGCCAAG
GCGCTGCTGG ACCAGGGTGC CGAGCTGACC GACGAGACGC GCGCGGTCGC TGCGGCCGAA
GCGCTCGATC CGGACACCTT CGCCGATCCG GCTTTGAAAT CGCAAACCGT CGGCGAGGCC
GCCTCGGTGG TGTCGGCGTT GCCGCGCGTC CGCGCCGCGC TGCTCAACTT TCAGCGCCAG
TTCGCGGCCC ACCCGCCCGG CGCGGTGCTG GACGGCCGCG ACATCGGAAC CGTGATCTGC
CCGGAGGCCG ACGTGAAGAT CTTCGTGGTC GCCGATGCGA GTGTCCGCGC GCATCGGCGC
ACGCTGGAAG CGCTGGCGCG CGGCGAGCCC GCCGATGAGG CGCAGGTGCT GGCAGATATT
CTCAAACGCG ACGAACGCGA CAAGAGCCGC GCGGCGGCGC CGCTAAAAGC CGCAGACGAT
GCGCACTTGC TCGATAACTC GCATTTGGAT ATAGAAAGCG GCGTCCGGGC CGCCATCGAC
ATTGTCGAGG CCGTTCGAGC GGGCCGGCAG CGGGTCTGA
 
Protein sequence
MIIAIDGPAA SGKGTLGKRL AAHYGYRHLD TGVIYRAVAK ALLDQGAELT DETRAVAAAE 
ALDPDTFADP ALKSQTVGEA ASVVSALPRV RAALLNFQRQ FAAHPPGAVL DGRDIGTVIC
PEADVKIFVV ADASVRAHRR TLEALARGEP ADEAQVLADI LKRDERDKSR AAAPLKAADD
AHLLDNSHLD IESGVRAAID IVEAVRAGRQ RV