| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0396 |
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| Symbol | |
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| ID | 3970885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 428504 |
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| End bp | 429481 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923510 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_530290 |
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| Protein GI | 90421920 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.302309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTG ATTCCGATGT GATCGTCGAT CGCCGCAGGA TGCGCCGCAA GCTGACCTTC
TGGCGCGTCG CGGCGGCGCT GGTGGCGATC GCCGCGGTGA TCGCGGTCGG CTCCGCCACG
GTGCCCTCGG GTCCGTTGGC GGGGACCTCC GGGGCGATCG CCCGCGTCAA GATCGACGGA
CTGATCCGCA GCGATGCCGA TCGTGTCGAG GCGCTGGAGC GGCTGGAAAA ATCCGCCGCG
GCCGCGGTGG TCGTGCACAT CAACTCGCCG GGCGGCACCA CCGCCGGCTC CGAGCAGCTT
TACGACGCGC TGGTGCGGCT CAAGGCCAAG AAACCGCTGG TGGTGGTGAT CGAGGGCCTG
GCGGCCTCCG GCGGCTATAT CGCGGCGATC GCCTCGGATC ATATCGTGGC GCAGCAGAGT
TCGCTGGTCG GCTCGATCGG CGTGCTGTTT CAGTTTCCCA ACTTCACCGA ATTGATGAAG
ACCGTCGGCG TCAAGGTCGA GGAAGTGAAG TCGTCGCCGC TGAAGGCCGC GCCGAACGGC
TTCGAGCCGA CCAGTCCGGA AGCCCGCGCC GCGCTGGAAT CGCTGGTGAA GGATTCCTAC
GCCTGGTTCC GCGGCCTGGT GAAGAGTCGC CGCGGCATGG ACGATCAGTT GCTGGAGAAA
GTCGCCGACG GCCGGGTGTT CACCGGGCGC CAAGCGGTCG ATCTGAAGCT GATCGATCAA
CTCGGCGACG AGAAGACTGC GATCGCCTGG CTGGTCGCGG AAAAGAAGGT CAAAGCCGAT
CTGCCGGTTC GCGACTACAA GTTGACACCG CGGTTCGGCG ATCTGACGTT CCTGCGGGCC
GCCACCTCGA TCACGCTCGA CGCGCTGGGC TTGAATGCGG TGGCCCGGCA GATCGAACGC
GCCGGCGTGG TGCAATCGGT CGAGCAGCTC GGGTTGGACG GCATGCTGGC GCTGTGGCGA
CCAGCGGGAT CGAACTGA
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| Protein sequence | MSFDSDVIVD RRRMRRKLTF WRVAAALVAI AAVIAVGSAT VPSGPLAGTS GAIARVKIDG
LIRSDADRVE ALERLEKSAA AAVVVHINSP GGTTAGSEQL YDALVRLKAK KPLVVVIEGL
AASGGYIAAI ASDHIVAQQS SLVGSIGVLF QFPNFTELMK TVGVKVEEVK SSPLKAAPNG
FEPTSPEARA ALESLVKDSY AWFRGLVKSR RGMDDQLLEK VADGRVFTGR QAVDLKLIDQ
LGDEKTAIAW LVAEKKVKAD LPVRDYKLTP RFGDLTFLRA ATSITLDALG LNAVARQIER
AGVVQSVEQL GLDGMLALWR PAGSN
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