Gene RPC_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0390 
Symbol 
ID3970879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp423698 
End bp424696 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID637923504 
Productacetyl-CoA carboxylase subunit beta 
Protein accessionYP_530284 
Protein GI90421914 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.789485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGC TGACCAACGT CGTTCGCCCC AAGATCCGCA ACATCCTGCG TCGCGAGACC 
CCGGAGAACC TGTGGATCAA ATGTCCGGAT TCCGGCCACC TGGTGTTCTA CAAGGACGTC
GAAGCCAACC AGTTCGTGAT CCCCGGCTCC AACTACCACA TGCGCATGGG GGCTGCGGCG
CGGCTGAAAT CGATTTTCGA CAATGAGACC TGGTACGACA TCGCGCTGCC CGAGGTCACG
CCCGATCCTT TGAAATTCCG CGACGAACGC AAATACGTCG ACCGCATCAA GGACGCCCGC
GCCAAGACCG GCATGAACGA CGCCATCAAG GTCGGTTACG GCAAGCTCGA AGGCGGCGCC
GTCGTGGTCG CGGTGCAGGA TTTCGACTTC ATGGGCGGAT CGCTCGGCAT GGCCGCCGGC
GAGGCGATCG TGCGCGGCAT CGAGCTTGCG GTCGAGAAGC AATCGCCGTT CATCCTGTTC
GCGGCCTCCG GCGGCGCGCG GATGCAGGAA GGCATCCTGT CGCTGATGCA GATGCCGCGC
ACCACGGTCG GCGTGCAGAT GCTGCGCGAC GCCAAGCTGC CCTACATCGT GGTGCTGACC
AATCCGACCA CCGGCGGCGT CACCGCGTCC TACGCCATGC TGGGCGACGT GCAGATCGCC
GAGCCCGGCG CGCTGATCGG CTTTGCCGGC GCCCGGGTAA TCGAGCAGAC GATTCGCGAG
AAACTCCCGG AAGGTTTCCA GCGCGCCGAA TATCTCAAAG AGCACGGCAT GATCGACATG
GTGGTGCACC GCCACGATTT GAAGGCAACG CTGGCGCGGC TGTGCCGGCT GCTGACCAAA
GCTCCGATGC CCGAAGTCAT CGTGGAGTCT GAGCCCGAAC CGGAGCCGGA GCCGGTGGTG
GCCGAAATCA TTCCGCCCAC GTCCGATCTG CCGGTCTCGG CGCCTGCGCC GGCCCCCGTT
GCCGCGCAAA CGCCGGCGCC CGCCGCGCCC TCGGCGTGA
 
Protein sequence
MNWLTNVVRP KIRNILRRET PENLWIKCPD SGHLVFYKDV EANQFVIPGS NYHMRMGAAA 
RLKSIFDNET WYDIALPEVT PDPLKFRDER KYVDRIKDAR AKTGMNDAIK VGYGKLEGGA
VVVAVQDFDF MGGSLGMAAG EAIVRGIELA VEKQSPFILF AASGGARMQE GILSLMQMPR
TTVGVQMLRD AKLPYIVVLT NPTTGGVTAS YAMLGDVQIA EPGALIGFAG ARVIEQTIRE
KLPEGFQRAE YLKEHGMIDM VVHRHDLKAT LARLCRLLTK APMPEVIVES EPEPEPEPVV
AEIIPPTSDL PVSAPAPAPV AAQTPAPAAP SA