| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0376 |
|---|
| Symbol | |
|---|
| ID | 3970904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 402179 |
|---|
| End bp | 402493 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637923490 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_530270 |
|---|
| Protein GI | 90421900 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.604182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCT TCGTCTACAT GCTCCGTTGC GCCGACGGCT CCTACTACGT CGGCAGCGCC
ACCGGCGACG ATCTCGCGCC GCGCGTGGCG CAACACGACG CCGGTAGCTA CCCGGGATAC
ACCTCGACCC GCCGGCCGGT GACGTTGGTG TGGTCGGAGC ATTTCGATCG CATCACCGAT
GCGATCGCGG TCGAACGGCA GATCAAGGGT TGGAGCCGCG CCAAGAAAGA GGCGTTGATC
CGCGGCGATT GGGGTGACAT CAGCCGACTG GCGCGACGCC GCGGCCGCGT GTGCAGCGGC
GAATCGACCG TATAG
|
|---|
| Protein sequence | MGIFVYMLRC ADGSYYVGSA TGDDLAPRVA QHDAGSYPGY TSTRRPVTLV WSEHFDRITD
AIAVERQIKG WSRAKKEALI RGDWGDISRL ARRRGRVCSG ESTV
|
|---|
| |