Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0366 |
Symbol | |
ID | 3970894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 391234 |
End bp | 393090 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923480 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_530260 |
Protein GI | 90421890 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.425505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGATG CCTCGAAGCG CCCTCCCATT CCCGTCGCAC CAGATGACAA TCCGGCGTCG ACCGACGCGA CCAAAATCGA CAAGCTGCTG CGGCAACAGG CGGCGATTGC GCGGTTCGGC ACGTTTTCGC TGCGCGAATG GGATCTCTCG AAGATCCTGA ACGAAGCGGT GCGGGTCTGC GCCGAGGGGC TCGACGCCCC CTTCAGCAAG GTCTGCCGGC ATCGCCCCGA GCAGAACGAT CTCTTGATCG TCGCCGGCTA CGGCTGGCAG GATGGCGTGG TCGGCCATGT GGTGTCGCGC GCCGATATGA GTTCGCCGCA GGGGCGCGCG TTTTCCACCG GCACGCCCGC GGTCTGCGAC GATCTGAAGA AGGACCGCTA CTTCGATCCG CCGGCGTTCT ATGCCGCGCA CGGCATCGTC TCGACCATCG ACGTCGTCAT CAGAGGCAGC GGCGACCAGC CCTACGGCAT CCTGGAAATC GACAACAATC AGCAGCAAGA CTACGACCAA TACGACGTCA ATTTCCTGAC CGGCTTCGCC AATGTGCTGG CCGAAGCCGT GGCGACCGCA TCGCGAGCGC GGGAGTTGCA GGACGCCTTC GATCGGATGA AGCGGCTGGC CGAGGACAAG GAGCGCCTGC TGCAGGAGAA GAACGCCGTC GATCTGCAGA TGCGCCAGGC GCAAAAGATG GAAGCGGTCG GGCAATTGAC CGGCGGCCTC GCCCACGACC TCAACAACAT CCTCACCGTC ATCTCCGGCA CCATCGAGAT TCTCGCCGCG GCGGTCGCGG ACCGGCCGCA ACTCGCGGCG ATCGCCAAGA TGATCGACGA GGCCGCGGTG CGCGGCGCCG AACTGACGCA GCGGCTGCTG GCATTCGCGC GCAAGCAGCC GCTGCATCCG CGCGCGATCG ACGTCAATGC GCTGATCGTC GAGGCGACCA ATCTGCTACG GCCGACGCTC GGCGATCACA TCACCCTCGT CACCACGCTG GCCGGGGAGC TGTCGCGCGC CCTGATCGAT CCCGGACAAC TCACCAACAC CATCCTCAAC CTCGCGCTCA ACGCCCGCGA TTCGATGCCC GAGGGCGGCG AGGTCAGCAT CACCACCCGC GACATCGTGC TCGACGCGAG CGCCGCGGCG GCCAATGAAC TCGATGCCGG CAGCTATGTG CTGGTCGCGG TCGGCGATTC CGGGCACGGC ATTCCGGCGG ACATCCTGCC CAGGGTGTTC GAGCCGTTCT TCACCACCAA GGATGTCGGC AAGGGATCCG GTCTCGGCCT CAGCATGGTC TATGGCTTCG TCAAGCAATC CAACGGCCAC GTCGTGATCG AGAGCGTGCC GGACCACGGC ACCACGGTGA CGATGCTGCT GCCGCAAGCC ACCGGGGTCG CTCAACCGCA ATTGGAATTG GTCAGCCAAC CGAAGATTCA GGGTGGCACC GAGACCATCC TGGTGGTGGA GGACGACGAC CTGGTGCGCC GCTACGTGAT CGGACAGATC GAAAGCCTGG GCTATGCGAC GCTGACCGCG GCCAACGCCG CGGAAGCGCT GGTGGTGATC GATAGCGCGC AGCCGATCGA TCTGTTGTTC ACCGACATGA CCATGCCCGG GGCGCTCAAC GGCCGGCAAC TGGCCGTCGA AGCGCGGCGT CGCAGGCCGG CGTTGAGCGT GCTGTTCAGT TCGGGCTTCA CCGAGGAGAG CGTGGTTCAT GATGGCCATA TCGATGCCGA GATGCTGTTC CTCGCCAAGC CCTACCGCAA AGCGGATCTG GCGCGCATGA TCCGCGTCGC CCTGACCGGC ACCGCGCAGC CACAGGCCGT GGCGCAGCCG GGGGCGCCGA TTCCCGCCGT GGCGTGA
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Protein sequence | MDDASKRPPI PVAPDDNPAS TDATKIDKLL RQQAAIARFG TFSLREWDLS KILNEAVRVC AEGLDAPFSK VCRHRPEQND LLIVAGYGWQ DGVVGHVVSR ADMSSPQGRA FSTGTPAVCD DLKKDRYFDP PAFYAAHGIV STIDVVIRGS GDQPYGILEI DNNQQQDYDQ YDVNFLTGFA NVLAEAVATA SRARELQDAF DRMKRLAEDK ERLLQEKNAV DLQMRQAQKM EAVGQLTGGL AHDLNNILTV ISGTIEILAA AVADRPQLAA IAKMIDEAAV RGAELTQRLL AFARKQPLHP RAIDVNALIV EATNLLRPTL GDHITLVTTL AGELSRALID PGQLTNTILN LALNARDSMP EGGEVSITTR DIVLDASAAA ANELDAGSYV LVAVGDSGHG IPADILPRVF EPFFTTKDVG KGSGLGLSMV YGFVKQSNGH VVIESVPDHG TTVTMLLPQA TGVAQPQLEL VSQPKIQGGT ETILVVEDDD LVRRYVIGQI ESLGYATLTA ANAAEALVVI DSAQPIDLLF TDMTMPGALN GRQLAVEARR RRPALSVLFS SGFTEESVVH DGHIDAEMLF LAKPYRKADL ARMIRVALTG TAQPQAVAQP GAPIPAVA
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