Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0323 |
Symbol | |
ID | 3971004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 344279 |
End bp | 345439 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923437 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_530217 |
Protein GI | 90421847 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCCGCG CTGACCGCGA CCCGGCGTTC GGCGTCTATA TCCACTGGCC GTTCTGCCTG TCGAAATGCC CGTATTGCGA TTTCAACAGC CATGTCCGCC ATGTCGCGAT CGACCAGGAA CGCTACCTGC GCGCCTTCGT CCGCGAGATC GAAACCACCG CGGAGCGCAC GCCGGGGCGC GAGGTCACCT CGATCTTCCT CGGCGGCGGC ACGCCGTCAT TGATGCAGCC CGCAACCGTC GGCGGCATTC TGGAGGCGAT CGGTAAGCAT TGGAACGTCG CCGCCGACGT CGAAATCTCG ATGGAGGCCA ATCCGACCAG CGTCGAGGCC ACGCGATTCC GCGGCTATCG TGCCGCCGGC GTCAACCGGG TGTCGCTCGG CGTGCAGGCG CTCGACGATC TGTCGCTGAA AACGCTCGGC CGGCTGCACA CCGCTCAGGA AGCGATGGAG GCGGTCGCGA TCGCGCGGTC GATCTTCGAG CGCTACTCGT TCGACCTGAT CTATGCCCGG CCCGGCCAGA CCCCGGCGAT GTGGCAGGCG GAATTGCAAA AGGCAATCGG AGAGGCCGCC GAACACCTGT CGCTGTATCA ACTCACCATC GAAGCCGACA CGCCGTTCTT CGGGCTGCAC GCCGCCGGCA AATTGCAGAC CCCCGACGAG GCGACCGCGC GGGCGCTGTA CGACGTGACG CAGGAAGTCT GCGCCGCGCA TGGATTGCCG TCCTACGAGA TTTCCAACCA CGCCCGCGCG GGCGCCGAGT GCCGGCACAA TCTGTTGTAT TGGCGCGGCC AGGAATATGC CGGGATCGGC CCCGGCGCCC ACGGCCGGCT CGACATCAAC GGCATCCGTC ACGCCATCGC CACCGAGAAG CGGCCGGAAG CCTGGCTGAT GCGGGTCGAG GCCTGCGGCC ACGGCGTGGT GGTCGACGAC CGGCTCAACA GCGAAGAGCG CGCCGACGAA TTCCTGCTGA TGGGACTGCG GCTCGCCGAG GGCATCGACC CCACGCGCTA TCAGGCATTG TCCGGCCGCG CGCTCGATCC GGCGCGGATC GCGGTGCTGC GCGAAGAGGG CGCCATCGTG GTCGATCCAA ATGGCCGGCT GCGCGTCACG CTGTCGGGAT TTCCGCTGCT CGACGCGGTG GTGGCGGATC TGGCGGCCTG A
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Protein sequence | MTRADRDPAF GVYIHWPFCL SKCPYCDFNS HVRHVAIDQE RYLRAFVREI ETTAERTPGR EVTSIFLGGG TPSLMQPATV GGILEAIGKH WNVAADVEIS MEANPTSVEA TRFRGYRAAG VNRVSLGVQA LDDLSLKTLG RLHTAQEAME AVAIARSIFE RYSFDLIYAR PGQTPAMWQA ELQKAIGEAA EHLSLYQLTI EADTPFFGLH AAGKLQTPDE ATARALYDVT QEVCAAHGLP SYEISNHARA GAECRHNLLY WRGQEYAGIG PGAHGRLDIN GIRHAIATEK RPEAWLMRVE ACGHGVVVDD RLNSEERADE FLLMGLRLAE GIDPTRYQAL SGRALDPARI AVLREEGAIV VDPNGRLRVT LSGFPLLDAV VADLAA
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