Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0314 |
Symbol | |
ID | 3971034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 332977 |
End bp | 333942 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923428 |
Product | hypothetical protein |
Protein accession | YP_530208 |
Protein GI | 90421838 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGCG ACGATCTGGC CCGCTCGACC CAACGTTTCA TCAAGCTTTT GCGGCCGGAA AATGCCGGCG CGATGGCCGC CACCGCGATC ACCTGGCTGA AGACGCCGCC CTATCTGCCG CAGCCGCGCA AGGCGTTGCG GCCGTTTCCG GCGGCGCCCG CCAGCCTCGG ACGGATGGGT GCGCTCGAGG TCAAGCTCGC CACCGAAAAA CGCGACGTCC GTCACGCGCA GAAACTGCGC TACCGGGTGT TCTACAAGAA CGGCACCGCG GTGGCCGACG CCGCCACGCT ATTGGCGCGC CGCGACAAGG ACGGCTTCGA CAGGATCTGC GATCATCTGT TGGTGGTCGA TCACGCCGCC AAGCCGACGC TGAGCGGCAA GCAGCCGGTG GTCGGCACCT ATCGGCTGTT GCGGCAGGAA TTGGCCGACC GCCACGGCGG CTTCTACACC GAGAACGAGT TCGATCTGTC CGGCATGATC GAGCGCCACC CCGGCCTGCG CTTTCTCGAG CTCGGCCGCT CCTGCGTGCT GCCGCGCTAC CGCAACAAGC GCACCGTCGA ACTGCTGTGG CAGGGCATCT GGAACTACGT CCGCCAATAC GACGTCGACG TGATGATCGG CTGCGCCAGT TTCGAGGGCA CCGATCCGGA CCGGCTGGCG CTGCCGCTGT CGTTCCTGCA TCACCACGCC TCAGCGCCGG AGGAATGGCG GGCCCGCGCC CATCCGTCGC GCCGCATCGA GATGAACCGG ATGGCGAAGG ACGCCATCGA CCCGAAGGCG GCGTTGCGCG AACTGCCGCC GCTGATCAAG GGCTACCTGC GGGTCGGCGC CATGGTCGGC GACGGCGCGG TGATCGACTA TCAGTTCGGC ACCACCGACG TGCTGATCGT GATGCCGGTG GCGGCGATCA AGGGCCGCTA CATCGAGCAT TTCGGCGGCA GCGACGCCCC GCGTCGCGCG GCGTAA
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Protein sequence | MHGDDLARST QRFIKLLRPE NAGAMAATAI TWLKTPPYLP QPRKALRPFP AAPASLGRMG ALEVKLATEK RDVRHAQKLR YRVFYKNGTA VADAATLLAR RDKDGFDRIC DHLLVVDHAA KPTLSGKQPV VGTYRLLRQE LADRHGGFYT ENEFDLSGMI ERHPGLRFLE LGRSCVLPRY RNKRTVELLW QGIWNYVRQY DVDVMIGCAS FEGTDPDRLA LPLSFLHHHA SAPEEWRARA HPSRRIEMNR MAKDAIDPKA ALRELPPLIK GYLRVGAMVG DGAVIDYQFG TTDVLIVMPV AAIKGRYIEH FGGSDAPRRA A
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