Gene RPC_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0314 
Symbol 
ID3971034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp332977 
End bp333942 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID637923428 
Producthypothetical protein 
Protein accessionYP_530208 
Protein GI90421838 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCG ACGATCTGGC CCGCTCGACC CAACGTTTCA TCAAGCTTTT GCGGCCGGAA 
AATGCCGGCG CGATGGCCGC CACCGCGATC ACCTGGCTGA AGACGCCGCC CTATCTGCCG
CAGCCGCGCA AGGCGTTGCG GCCGTTTCCG GCGGCGCCCG CCAGCCTCGG ACGGATGGGT
GCGCTCGAGG TCAAGCTCGC CACCGAAAAA CGCGACGTCC GTCACGCGCA GAAACTGCGC
TACCGGGTGT TCTACAAGAA CGGCACCGCG GTGGCCGACG CCGCCACGCT ATTGGCGCGC
CGCGACAAGG ACGGCTTCGA CAGGATCTGC GATCATCTGT TGGTGGTCGA TCACGCCGCC
AAGCCGACGC TGAGCGGCAA GCAGCCGGTG GTCGGCACCT ATCGGCTGTT GCGGCAGGAA
TTGGCCGACC GCCACGGCGG CTTCTACACC GAGAACGAGT TCGATCTGTC CGGCATGATC
GAGCGCCACC CCGGCCTGCG CTTTCTCGAG CTCGGCCGCT CCTGCGTGCT GCCGCGCTAC
CGCAACAAGC GCACCGTCGA ACTGCTGTGG CAGGGCATCT GGAACTACGT CCGCCAATAC
GACGTCGACG TGATGATCGG CTGCGCCAGT TTCGAGGGCA CCGATCCGGA CCGGCTGGCG
CTGCCGCTGT CGTTCCTGCA TCACCACGCC TCAGCGCCGG AGGAATGGCG GGCCCGCGCC
CATCCGTCGC GCCGCATCGA GATGAACCGG ATGGCGAAGG ACGCCATCGA CCCGAAGGCG
GCGTTGCGCG AACTGCCGCC GCTGATCAAG GGCTACCTGC GGGTCGGCGC CATGGTCGGC
GACGGCGCGG TGATCGACTA TCAGTTCGGC ACCACCGACG TGCTGATCGT GATGCCGGTG
GCGGCGATCA AGGGCCGCTA CATCGAGCAT TTCGGCGGCA GCGACGCCCC GCGTCGCGCG
GCGTAA
 
Protein sequence
MHGDDLARST QRFIKLLRPE NAGAMAATAI TWLKTPPYLP QPRKALRPFP AAPASLGRMG 
ALEVKLATEK RDVRHAQKLR YRVFYKNGTA VADAATLLAR RDKDGFDRIC DHLLVVDHAA
KPTLSGKQPV VGTYRLLRQE LADRHGGFYT ENEFDLSGMI ERHPGLRFLE LGRSCVLPRY
RNKRTVELLW QGIWNYVRQY DVDVMIGCAS FEGTDPDRLA LPLSFLHHHA SAPEEWRARA
HPSRRIEMNR MAKDAIDPKA ALRELPPLIK GYLRVGAMVG DGAVIDYQFG TTDVLIVMPV
AAIKGRYIEH FGGSDAPRRA A