Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0270 |
Symbol | |
ID | 3971104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 287101 |
End bp | 288402 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923384 |
Product | ammonium transporter |
Protein accession | YP_530164 |
Protein GI | 90421794 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.3359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA TCCGTCGCGC AGCGCGTCTC GCGCTGGCCG CTTGCTTTGC GGCAAGCAGT TTTTCCACCG CGGCGTTGGC CGAGGACAGC ACTATCAACG GCGCCGACAC CGCCTGGATG ATCGTCGCCA CCGCGCTGGT GCTGATGATG ACCATCCCGG GCCTGGCGCT GTTCTACTCC GGCATGGTGC GGAAGAAGAA CGTGCTCGCC ACCATGGCGC AGAGCCTGGC CGCGGTGGCG CTGATCTCGA TCCTGTGGGT GGCGTTCGGC TATTCGCTGG CGTTCACCGG CGACGGCGCG CTGATCGGCT CGTTCGACCG GCTGTTTCTT TCCGGCATGA CCATGGAGGG CGTCAACCCG CTCGCCAAGA CCATCCCCGA AGCGCTGTTC ATGCTCTACC AGATGACGTT CGCGATCATC ACGGTGGCGC TGGTGGCGGG ATCGGTGGCC GACCGGATGC GGTTCTCGGC CTATCTGGTG TTCTCGATCG GCTGGTTCGT GGTGGTCTAT GTGCCGCTGA CGCATTGGGT GTGGGGCGGC GGTTTCCTCG GCTCCGCGGG CGTGCTGGAT TTCGCCGGCG GTCTCGTGGT GCATCTGTCG GCGGGCATCG GCGGGCTGGT CGCAGCCTTG GTGATCGGCC GCCGGCAAGG CTACGGCGCC GACAATCTGT CGCCGTTCGA CCTGTCGCTG GCGGTGATGG GCACCGGGCT GTTGTGGGTC GGCTGGTTCG GCTTCAACGG CGGCTCGGCG CTCGGCGCCA ATGCCCACGC CGTGATGGCG ATCACCGCCA CCCATCTGTC GGCTTGCGCC GGCGCTCTCG CCTGGGGCGC GATCGAATGG ATCACCCGGC GCAAGCCCTC CGTGCTGGGC ATGATTTCGG GCGCGGTCGC CGGGCTTGGC ACCATTACGC CGGCGTCGGG CTTCGTCGCG CCTTGGCATG GCATCGTGAT CGGCCTGATC GCCGGCACGG TGTGTTTCTG GGCCTGCACC AGCCTCAAGC AACGGTTCGG CTATGACGAT TCGCTGGACG TGTTCGGCGT CCACGGCGTC GGCGGCCTGG TCGGCACCCT GCTCGGCGGG GTGTTCGCCA CCGCGGCGAT CGGCGGCACC GCCGGCCTGA TCGAAGGCCA TTGGATGCAG CCGCTGATCC AGCTCTACGG CATCGCCGTC ACCCTGCTGT GGTCGGGCGC GGCCACCTTC GGACTGCTGA TGCTGGTCAG GCTGATGGTG CCGCTGCGGG TGTCGCGCGA GCACGAGCGC GAGGGCCTGG ACATTTCGCA GCACGGCGAG GCGCTGCAGT AG
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Protein sequence | MASIRRAARL ALAACFAASS FSTAALAEDS TINGADTAWM IVATALVLMM TIPGLALFYS GMVRKKNVLA TMAQSLAAVA LISILWVAFG YSLAFTGDGA LIGSFDRLFL SGMTMEGVNP LAKTIPEALF MLYQMTFAII TVALVAGSVA DRMRFSAYLV FSIGWFVVVY VPLTHWVWGG GFLGSAGVLD FAGGLVVHLS AGIGGLVAAL VIGRRQGYGA DNLSPFDLSL AVMGTGLLWV GWFGFNGGSA LGANAHAVMA ITATHLSACA GALAWGAIEW ITRRKPSVLG MISGAVAGLG TITPASGFVA PWHGIVIGLI AGTVCFWACT SLKQRFGYDD SLDVFGVHGV GGLVGTLLGG VFATAAIGGT AGLIEGHWMQ PLIQLYGIAV TLLWSGAATF GLLMLVRLMV PLRVSREHER EGLDISQHGE ALQ
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