Gene RPC_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0201 
Symbol 
ID3971189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp220367 
End bp220891 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID637923314 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_530095 
Protein GI90421725 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.814424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC TTGAAATCCG GCCGACCTCA TTGGCCGACC TCCCCGCCAT CACCGCGATC 
TATGCCGAAG CGGTGCGCTG CGGCACCGCC ACTTTCGAAC TGACCCCGCC GGATCTCGCG
GAGATGACCC GCCGCTTTGC GGCGCTGACC GGCGGCGGCT TTCCCTATCT GGTGGCCCGT
CGCGCCGGCG AGCTGCTCGG CTATGCCTAT GCGGGCCCGT ATCGGCCGCG GCCGGCCTAT
CGCTTCACCG TGGAGAATTC GATCTACTTG GCGCCGGCGG CGCAGCGCCA GGGCGTAGGG
TCGCGTTTGC TCGGCCGCCT GATCGCGGAG TCCGAGGCGC GGGGTTACCG CCAGATGATC
GCGGTGATCG GCGGCTCCGA TAATCTCGGC TCGATCGCGC TGCACGGCCG CACCGGCTTC
CAGATGATCG GCGTGCACCC CAGCGTCGGC TTCAAATTCG GCCGCTGGCT CGACAGCGTG
CTGATGCAGC GGATGCTCGG CGAGGGCGAC GCCACGACGC CGTAA
 
Protein sequence
MSELEIRPTS LADLPAITAI YAEAVRCGTA TFELTPPDLA EMTRRFAALT GGGFPYLVAR 
RAGELLGYAY AGPYRPRPAY RFTVENSIYL APAAQRQGVG SRLLGRLIAE SEARGYRQMI
AVIGGSDNLG SIALHGRTGF QMIGVHPSVG FKFGRWLDSV LMQRMLGEGD ATTP