Gene RPC_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0200 
Symbol 
ID3971188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp219235 
End bp220050 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID637923313 
Producthypothetical protein 
Protein accessionYP_530094 
Protein GI90421724 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACT TCGACCGTAA CTATGCTTCT CCTTTCGGCC GGGCCGCCGG GCGCGTCGAC 
GCCGCTGCCG TCGATGCCGG CCTGCGCGCC TACATGCTGC GCATCTACAA CTATATGACG
ATCGGCCTCG CCATCACCGG CGCGGCCGCG CTCGGCGTCT ACAAGTTCGC CGTCACCAGC
GATATGGCTG AAGCGGTTCG CAGCGCCAGC GGCGCGGCGA TCCGGGTCGC CGAAGGTCAG
TTCCTGACCT CGTTCGGTTA CATGATGTTC GCAAGCCCCT TGAAGTGGGT GTTCATCCTC
GCCCCCTTGG TGATGGTGTT CGCGATCTCG TTCGGCATTA ACCGGCTGAA GCCGGCCACC
GCGCAAATGC TGTTCTGGGC GTTCGCCGCC CTGATGGGCA TTTCGCTGTC GTCGATCTTC
CTGGTCTATA CCCACACCTC GATCGTGCGG GTGTTCTTCA TCACCGCGGC CTCGTTCGGT
GCGCTGAGCC TGTACGGCTA CACCACCAAG CGTGACCTCA CCGGGATGGG TTCGTTCCTG
ATGATGGGCC TGTTCGGCGT CATCCTGGCG AGCCTGGTGA ACCTGTTCGT GGCCTCGACC
ATGCTGCAGT TCATCGTCTC GGTGGTCGGC GTGCTGGTGT TCGCGGGCCT CACCGCCTGG
GATACCCAGC GGCTGAAGAA CGACTACATC TACGGCTATG CCTCGCAGGG CGGCGACGTC
GCCGACCGCG CGGCGATCAC CGGAGCGCTG TCGCTGTACT TGAACTTCAT CAACCTGTTC
ACGCTGCTGC TGCAGCTCCT GGGACAGCGC GACTGA
 
Protein sequence
MSDFDRNYAS PFGRAAGRVD AAAVDAGLRA YMLRIYNYMT IGLAITGAAA LGVYKFAVTS 
DMAEAVRSAS GAAIRVAEGQ FLTSFGYMMF ASPLKWVFIL APLVMVFAIS FGINRLKPAT
AQMLFWAFAA LMGISLSSIF LVYTHTSIVR VFFITAASFG ALSLYGYTTK RDLTGMGSFL
MMGLFGVILA SLVNLFVAST MLQFIVSVVG VLVFAGLTAW DTQRLKNDYI YGYASQGGDV
ADRAAITGAL SLYLNFINLF TLLLQLLGQR D