Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0183 |
Symbol | |
ID | 3971210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 200915 |
End bp | 202318 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923296 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_530077 |
Protein GI | 90421707 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCTT ACGATCTCGT TGTTATCGGC ACCGGTCCCG GCGGATATGT CTGCGCGATT CGCGCCGCCC AACTCGGCCT CAAGGTCGCC GTGGTGGAAA AGCGCGACAC CTTCGGCGGC ACCTGCCTGA ACATCGGCTG CATGCCGTCG AAGGCGCTGC TCTACGCCTC GGAGATGTTC GAGGAGGCCG GGCATTCCTT CGCCAAGATG GGCGTCGTCG TGCCGAAGCC ATCGCTCGAT CTGCCGGCGA TGATGACCTT CAAGCAGCAG GGCATCGACG GCAACGTCAA GGGCGTCGAG TTCCTGCTGA AGAAGAACAA GATCGACGCG CTGCGCGGCT CCGGCCGCGT GCTCGGCACC GGCAAGGTCG AAGTGACAAG TGCGGACGGC AAGACGCAGA CCGTCGACGC CAAATCGATC GTGATCGCCT CGGGCTCGAC CTACACGCCG CTGAAAGGCG TCACCGTCGA TGAGAAGCGC ATCGTGTCGT CGACCGGCGC GCTGTCGCTC GACAAGGTGC CGGGCAAACT CTTGGTGATC GGCGCCGGGG TGATCGGGCT CGAGCTCGGC TCGGTGTGGC GCCGGCTCGG CGCCGAAGTC ACCGTGGTGG AATTCCTCGA TCGCATCCTG CCCGGCATGG ATGGCGAGGT GGTCAAGCAA TTCCAGCGCA TCCTGGAAAA GCAGGGCTTC AACTTCAAGC TCGGCAGCAA GGTGACGGCG GTGGATTCGT CGGGCGCGAC GCTGAAGGCG ACCATCGAGC CGGCCGCCGG CGGCAAGCCG GAAACGCTGG AAGCCGACGT GGTGCTGGTG GCGATCGGAC GGATTCCCTA CACCAAGGGG CTCGGCCTCG CCGAAGCCGG CATCACGCTC GACGAGCGCG GCCGGATCGC GATCGACGCG CACTTCGCCA CGAGCTTAAA GGGCGTTTAT GCGATCGGCG ACGTCGTCGC CGGTCCGATG CTGGCGCACA AGGCCGAGGA CGAGGGCGTC GCGGTCGCCG AAATCATCGC CGGCAAGGCC GGCCATGTGA ACTACGACGT GATCCCGGGC GTGGTCTACA CCACGCCGGA AGTGTCCTCG GTCGGCAAGA CCGAAGAGGA ATTGAAGCAG GCCGGCGTGG CCTACACGGC GGGCAAGTTT CCGTTCACCG CCAACGGCCG CTCCAAGGTC AATCAGACCA CCGACGGTTT CGTGAAAATT CTCGCCGACG CCAAGACCGA CCGCGTGCTC GGCGTGCATA TCGTCGGCCG CGAGGCCGGC GAGCTGATCC ACGAGGCCGC GGTGCTGATG GAGTTCGGCG GCTCGGCGGA AGACCTGGCG CGCACCTGCC ACGCCCATCC GACGCGCTCG GAGGCGGTCA AGGAAGCCGC GCTTGCGGTC GGCAAACGCG CCATCCATAT GTGA
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Protein sequence | MASYDLVVIG TGPGGYVCAI RAAQLGLKVA VVEKRDTFGG TCLNIGCMPS KALLYASEMF EEAGHSFAKM GVVVPKPSLD LPAMMTFKQQ GIDGNVKGVE FLLKKNKIDA LRGSGRVLGT GKVEVTSADG KTQTVDAKSI VIASGSTYTP LKGVTVDEKR IVSSTGALSL DKVPGKLLVI GAGVIGLELG SVWRRLGAEV TVVEFLDRIL PGMDGEVVKQ FQRILEKQGF NFKLGSKVTA VDSSGATLKA TIEPAAGGKP ETLEADVVLV AIGRIPYTKG LGLAEAGITL DERGRIAIDA HFATSLKGVY AIGDVVAGPM LAHKAEDEGV AVAEIIAGKA GHVNYDVIPG VVYTTPEVSS VGKTEEELKQ AGVAYTAGKF PFTANGRSKV NQTTDGFVKI LADAKTDRVL GVHIVGREAG ELIHEAAVLM EFGGSAEDLA RTCHAHPTRS EAVKEAALAV GKRAIHM
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