Gene RPC_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0109 
Symbol 
ID3971329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp124896 
End bp125567 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content65% 
IMG OID637923225 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_530007 
Protein GI90421637 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.12066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGC TGTTCGTCTA CGCGCATCCG GAACCTAGCT CCTTCACCGG CGCGTTGAAA 
GATGCCGGCG CCGCGGCGCT GCGGCGGGCC GGCCACCATG TGGAGATCTC GGATCTTTAC
GCCGAGAAGT TCGATCCGGT GGCCGGACGG CACGATTTCA CATCCGCGGC GGATCCCGAG
CGGTTTCATT ACCAGACCGA ACAGGCGCTG GCGCATGAAA CGAATGGCTT TGCGCCCGAC
CTGATGCGCG AGCAACGACG CTTCCTGAAC GCCGATCTGG TGGTCTGGCT TTATCCGATC
TGGTGGGGCG GTATGCCGGC CATCCTGAAG GGCTGGTTCG ACCGCGTGCT CGCCTTCGGT
TTCGCCTATG CGGACGGCCG CCGCTTCGAC AGCGGCTTCT TTCCGGACAA GCGCGGCCTG
TTGTGCCTCA GCACCGGCGG CACGCAGCGA CGATTCTCCA AAGGCGACGC CTATGGCGAC
ATCGAGACGG TGCTGTGGCC GGCGCAGCGG TTGATGATCT CCTATCTTGG GATGCAGGCG
CTGCAGCCGT TCGTCGCGTA CGCAGCACCC CGCGTCGATG CGGACGGCCG CGCCGCCTAT
CTGCAGCAAT GGTGCGCGCG GTTGCTGCAA GCCGCCGAGC AAATGACCGA AGCTGAAGCG
CCGCCGAACT AA
 
Protein sequence
MNVLFVYAHP EPSSFTGALK DAGAAALRRA GHHVEISDLY AEKFDPVAGR HDFTSAADPE 
RFHYQTEQAL AHETNGFAPD LMREQRRFLN ADLVVWLYPI WWGGMPAILK GWFDRVLAFG
FAYADGRRFD SGFFPDKRGL LCLSTGGTQR RFSKGDAYGD IETVLWPAQR LMISYLGMQA
LQPFVAYAAP RVDADGRAAY LQQWCARLLQ AAEQMTEAEA PPN