Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0109 |
Symbol | |
ID | 3971329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 124896 |
End bp | 125567 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923225 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_530007 |
Protein GI | 90421637 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.12066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTGC TGTTCGTCTA CGCGCATCCG GAACCTAGCT CCTTCACCGG CGCGTTGAAA GATGCCGGCG CCGCGGCGCT GCGGCGGGCC GGCCACCATG TGGAGATCTC GGATCTTTAC GCCGAGAAGT TCGATCCGGT GGCCGGACGG CACGATTTCA CATCCGCGGC GGATCCCGAG CGGTTTCATT ACCAGACCGA ACAGGCGCTG GCGCATGAAA CGAATGGCTT TGCGCCCGAC CTGATGCGCG AGCAACGACG CTTCCTGAAC GCCGATCTGG TGGTCTGGCT TTATCCGATC TGGTGGGGCG GTATGCCGGC CATCCTGAAG GGCTGGTTCG ACCGCGTGCT CGCCTTCGGT TTCGCCTATG CGGACGGCCG CCGCTTCGAC AGCGGCTTCT TTCCGGACAA GCGCGGCCTG TTGTGCCTCA GCACCGGCGG CACGCAGCGA CGATTCTCCA AAGGCGACGC CTATGGCGAC ATCGAGACGG TGCTGTGGCC GGCGCAGCGG TTGATGATCT CCTATCTTGG GATGCAGGCG CTGCAGCCGT TCGTCGCGTA CGCAGCACCC CGCGTCGATG CGGACGGCCG CGCCGCCTAT CTGCAGCAAT GGTGCGCGCG GTTGCTGCAA GCCGCCGAGC AAATGACCGA AGCTGAAGCG CCGCCGAACT AA
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Protein sequence | MNVLFVYAHP EPSSFTGALK DAGAAALRRA GHHVEISDLY AEKFDPVAGR HDFTSAADPE RFHYQTEQAL AHETNGFAPD LMREQRRFLN ADLVVWLYPI WWGGMPAILK GWFDRVLAFG FAYADGRRFD SGFFPDKRGL LCLSTGGTQR RFSKGDAYGD IETVLWPAQR LMISYLGMQA LQPFVAYAAP RVDADGRAAY LQQWCARLLQ AAEQMTEAEA PPN
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