Gene RPC_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0100 
Symbol 
ID3971320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp114221 
End bp114790 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content65% 
IMG OID637923216 
Productglutathione-dependent formaldehyde-activating enzyme 
Protein accessionYP_529998 
Protein GI90421628 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02820] S-(hydroxymethyl)glutathione synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC ATATCCATCC CGCGGTCGAT CAAGGCGTGA AGCAGGGCTC GGGCAGCTTT 
GCCGGCGGAA CCCTGGTGTG CAAATGCCAG GACCGGCCGG TCAAGGTCGG CATCAAGGGC
GACGTCGCCC ACAATCACGC CTGCGGCTGC ACCAAATGCT GGAAGCCGGA CGGCGCCACC
TTCTCGGTGG TCGCGGTGGT GCCGCGCGAC AACGTCACCG TGCTGGAGAA CGGCGACAAG
CTGCACGTGG TCGACGCCTC GGCGACCATC CAGCGCCATG CCTGCAAGGT CTGCGGCACC
CATATGTACG GCCGCATCGA AAACAAATCG CATCCGTTCT ACGGGCTCGA TTTCATCCAT
CCCGAGCTGT TCCAGGAGGG CGGTTCGGCG GCGCCGGAAT TCGCCGCGTT CGTCTCCTCG
GTGATCGAAT CCGGCGTCGA TCCGTCGGAG ATGCCTGGCA TCCGCGCCCG GCTGAAGGAG
CTCGGGCTGG AGCCCTATGA TTGCCTGTCG CCGGGACTGA TGGACGCGAT CGCCACCTCG
GTGGCCAAGT CGCAGCAAAA AGCCGCCTGA
 
Protein sequence
MTVHIHPAVD QGVKQGSGSF AGGTLVCKCQ DRPVKVGIKG DVAHNHACGC TKCWKPDGAT 
FSVVAVVPRD NVTVLENGDK LHVVDASATI QRHACKVCGT HMYGRIENKS HPFYGLDFIH
PELFQEGGSA APEFAAFVSS VIESGVDPSE MPGIRARLKE LGLEPYDCLS PGLMDAIATS
VAKSQQKAA