| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0093 |
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| Symbol | |
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| ID | 3971313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 105246 |
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| End bp | 105857 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923209 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_529991 |
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| Protein GI | 90421621 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACG TCATCGCCCT CAACGAAGCC GGCCGCCAAG GCATCGTCGC CGCGCGGGCG
ACCACCGACG AGATGTTGCT CGAGGCGATC GCGTCCGGCA ATCGCTGCGC AATGCACACG
CTGTATGCCC GTCATCATCT GCGGGTCTAC CGTTTCATTC TGCGGATGGT GCGCGACGCC
TCGGTGGCCG AGGACCTGGT CAGCCAGGTG TTTCTCGACG TTTGGCGCAC CGCCGGCCAG
TTCGAAGGCC GCGCCCTGGT CTCCACCTGG CTGTTGTCGA TCGCCCGCTT CAAGGCGCTG
ACCGCGCTGC GCCAGCGCCA GCACGAAGAG CTCGATCAGG ACGACGTGCT GGAGATCGCC
GATGGCGCCG AGACGCCCGA GGCGGCGCTG GATCGCAGCC GCACCAACGC CATCCTGCGC
GCCTGCGTCG CCAAGCTGTC GCCGGCGCAT CGCGAGATCA TCACCCTCGT TTACTATCAT
GAGAAGTCGG TGGAGCAGGC CGGCCTGATC GTCGGCATTC CGCCCAGCAC CGTCAAGACA
CGGATGTTCT ATGCCCGCAA GCAGTTGGCC GAATTGTTGA AAAGCCAAGG GATCGAAAAT
CTCGCGGCGT GA
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| Protein sequence | MQNVIALNEA GRQGIVAARA TTDEMLLEAI ASGNRCAMHT LYARHHLRVY RFILRMVRDA
SVAEDLVSQV FLDVWRTAGQ FEGRALVSTW LLSIARFKAL TALRQRQHEE LDQDDVLEIA
DGAETPEAAL DRSRTNAILR ACVAKLSPAH REIITLVYYH EKSVEQAGLI VGIPPSTVKT
RMFYARKQLA ELLKSQGIEN LAA
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