| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0089 |
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| Symbol | |
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| ID | 3971347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 100508 |
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| End bp | 101728 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637923205 |
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| Product | major facilitator transporter |
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| Protein accession | YP_529987 |
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| Protein GI | 90421617 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGACG CAATCATGAT CGACGAAGCC GCCGGCGATG CGCGGGCGCG GTCGAACCTG
TTGCGGCTCG GCATCGCCCA GGCGCTGACC GGCGCCAACG CCGCGGTGAT CTTCGCCACC
GGCGCGATCG TCGGCGCCAC GCTGGCGCCC GACGCCACCT TCGCCACACT GCCGGTGTCG
GTCTATGTGG TCGGCATGGC GGCCGGCACG CTGCCGACCG GGGCGATCTC GCGGGCGTTC
GGCCGCCGTG TCGCCTTCCT GCTCGGCGGC GGCTGCGGCG CGCTGTGCGG AGCGCTGGCC
TGCCTCGCCA TCCTGCACGG CTCGTTCGCG CTGTTTTGCG TCGCCACCTT CCTCGGCGGG
CTCTACGGCG CGGTGGCGCA ATCCTATCGC TTCGCCGCCG CCGACGGCGC CAGCGTGGCG
TTTCGGTCGC GCGCGATTGG CTGGGTGATG ACCGGCGGCA TCTTTGCCGG CGTGATCGGT
CCGCAGCTGG TGCAATGGAC CATGGATATC TGGCCACCCT ATCTGTTCGC CTTCAGCTTC
GCCACCCAGG CCGTGGTGGC GCTGATCGCG ATGGCGGTGT TGGCCGGGGT CGACGCGCCG
CGGCCAAAGC CCGCCGAACT CGCCGGCGGC CGGCCGCTGT GGCAGATCGC CCGGCAGCCG
CGCTTCGTCA TCGCGGTGGT GTGCGGCGTG GTGTCCTACG CGATGATGAA CCTGGTGATG
ACTTCGGCGC CGCTGGCGAT GCAGATGTGC GGCTTGTCGA TCAGCGATTC CAACACCGGG
ATTCAGTGGC ACATGGTGGC GATGTATGGC GCGAGTCTGC TGGCCGGGCC GATGATCGCC
CGGTTCGGCG CCGCGCGCAC CGCGGCGCTC GGGCTCGTGC TGGAAGCGCT CGCCGCCTGC
ATCGACCTGT CCGGCGTCAC CGCGCTGCAT TTCTGGGCCG GGCTGATCGC GCTCGGCATC
GGCTGGAATT TCGGCTTCGT CGGCGCCTCG GCGCTGGTGC TGGAAACCCA CCTGCCGGCG
GAGCGCAACA AGGTGCAGGC GTTGAACGAT TTCCTGGTGT TCGGGGTGAT GGCGCTGGGC
TCGTTCGCCT CCGGCGGCGT GCTGGCGCTG TACGGCTGGT CGACCATCAA CTGGGTGGTG
TTTCCGCCGG TGCTGCTGGC GCTGGCGGTG CTGGCGTTCG CGACCTGGGG CCAACGGCGA
GCGGTGCCGC GCGGTTCGTG A
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| Protein sequence | MVDAIMIDEA AGDARARSNL LRLGIAQALT GANAAVIFAT GAIVGATLAP DATFATLPVS
VYVVGMAAGT LPTGAISRAF GRRVAFLLGG GCGALCGALA CLAILHGSFA LFCVATFLGG
LYGAVAQSYR FAAADGASVA FRSRAIGWVM TGGIFAGVIG PQLVQWTMDI WPPYLFAFSF
ATQAVVALIA MAVLAGVDAP RPKPAELAGG RPLWQIARQP RFVIAVVCGV VSYAMMNLVM
TSAPLAMQMC GLSISDSNTG IQWHMVAMYG ASLLAGPMIA RFGAARTAAL GLVLEALAAC
IDLSGVTALH FWAGLIALGI GWNFGFVGAS ALVLETHLPA ERNKVQALND FLVFGVMALG
SFASGGVLAL YGWSTINWVV FPPVLLALAV LAFATWGQRR AVPRGS
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