Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0079 |
Symbol | |
ID | 3971336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 88026 |
End bp | 90491 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923195 |
Product | hypothetical protein |
Protein accession | YP_529977 |
Protein GI | 90421607 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACGCG CGCTGTGGGT TCTGGCGGTG CTGCTCAGCC ATTGGCGAAG GCATCCGCTG CAGCTCGCCA CCCTGCTGGT CGGGCTGATT TCCGCGACCG CGTTGTGGAG CGGTGTGCAG GCGCTGAACC AGCAGGCCCG GGTCAGCTAT GATCGCGCCG CCTCCGCGCT CGGCGGCGCC CGCACCGCCA CGCTGGTCGG CCGCGACGGC GAGACCCTGG CGCAGCACAT CTTCGTCGAT CTGCGCCGCG CCGGCTGGCC GGTGTCGCCG CTCGTGGAAG GCCGTATCCA GATCGGCGGC CGATCATTGC GGCTGCTCGG CGTCGAGCCG CTGTCGCTGC CGATCGAGGC CAGCGCCGCG CCGGCGATCG GCACCTCGGG CCTGCAAGGA TTCCTATCGC CGCCGGGGCA GGCGCTGATC GCGCCGGACA CTTTGGCCGA ACTCAAGGCC GCGGCCGGCG ACACCCCGCA GACCAATAGC GGCGCGACGC TGCCGCCGTT GACGCCGCAG AATGAACTGG TGCCGGGCCT GCTGGTGGTC GACATCGGCG TGGCGCAGCG TCTCCTCAAC ATGCCGGACA AGATCTCGCG GCTGCTGCTC GGCCAACGCG ATCTCGGCCC GCGCGCGCCG CTGGCGAGCG TCGCCGGCGA TACGCTGCGG CTGGTCGAGC CCGATGCCGA GACCGATCTG GAGCGGCTGA CCGACAGTTT CCACCTCAAC CTCACCGCGT TCGGGCTATT GTCGTTCCTG GTCGGGCTGT TCATCGTCAA TTCGGCCATT GGCCTCGCCT TCGAGCAGCG CCGGCCGATG CTGCGCACGC TGCGCGCCTG CGGCGTCTCG GCCTTTCAGC TCAATAGCGT GCTGATCGTC GAATTGGTGG CGCTGGCGCT GCTCGCCGGA TTGATCGGTC TGGTGTGCGG TTACTTCATC GCCGCGACGC TGCTGCCCGA CGTCGCCGCC AGCCTGCGCG GGCTGTACGG CGCGCAGATT CCCGGCCAAT TGAGTTTGCG CCCGCAATGG TGGGCGGCCG GCATTGCGAT CAGCGTGATC GGCGCGCTGG GTGCCGCATC CGCCAGCCTG TTGAAAGCGA TCCGGCTGCC GGTGTTGGCG GCGGCGCAGC CTTACGCCTG GCAGCAGGCG CAGCAGACCG CGCTCGTCGT GCAGGGCGCG CTGGCGCTCT TGGTATTCGC TGGCGGCCTC GGCTGTTTGC TGCTCGGCGA TTCGCTAGTG GCGGGCTTTG CGGTGCTGGC GGCGATCCTG CTCGGCGCGG CCTTGGCGCT GCCGGCGGTG CTGGGATTGG TGCTGCTGAT CAGCGAGCGC GCCGCGCGAA AACCGCTGAG TAAATGGTTC TGGGCCGACA GCCGGCTGCA ACTCTCCGGG CTGTCGCTGG CGCTGATGGC GCTGCTGCTG GCGCTCGCGG TCAATGTCGG CGTCGGCACC ATGGTGCAGA GCTTCAGCAA GACCTTCACC GGCTGGCTCG ACGGCAGGCT CGCCGCCGAG GTCTATCTCA ACGCCGCGAG CGACGCCCAG GCGGGCGAGA TCAAGGCTTG GCTACGGGAT CGCCCCGAGG TGCAGGCACT GCTGCCCGGC AGCCGCGCCG AGGCGCAGCT CGGCGGCTGG CCGATCGAAC TGATCGGCTT TGCCGACCAC GCCACCTATC GCGAGCAATG GCCGCTGCTG GAATCGACCG CCAATGCCTG GGACCTTGTT GCGCGCGGCG AGGCGGCGCT GGTCAGCGAA CAGCTCGCGC GGCGGCTCAA GCTCAAGCTC GGCGATCGCG TGCAGGTGCC GACGCCGCAA GGCCCTTGGC CGCTCGACGT GGCGGCGATC TATGCCGACT ATGGCAATCC GCGCGGCCAG CTCGGCGTCG CCATCGCGCC TTTGGTGGCG CATTTCCCCG GCATCGCGCA GACGAGATTC GGCCTGCGCG TGACGCCCGC CGCGGTGCCG GCGCTGGTCA CGGCATTGCG GGAAAAATTC GCGCTGGATA ATCGCAGCCT CGCCGACCAG ACCGCGCTGA AGGCGGAATC GCGAAAAATC TTCAACCGCA CCTTCGCGGT GACCAACGCG CTGAACGCCT TCACGCTCGG CATCGCAGGC GTGGCGCTGT TGACTAGCCT CCTGACGCTG AGCCAGTCGC GGCTGCCGCA GCTGGCACCG TTATGGGCGA TCGGCATTAC GCGTCGGAAA CTCGCGCTGA TCGAACTGAT GAAGACGCTG TCGGTGGCGC TGATCACCGC GCTGCTGGCG CTGCCGCTCG GGTTGGTGGT CGCCTGGTGC CTGATCGCGG TGGTGAACGT CAAGGCGTTC GGCTGGCGGC TGCCGTTCCA GGTGTTTCCC GAACAGCTCG TGCAATTGCT CGGTATCGCG ATGCTGGCGG CGTTGCTCGC AGCACTGCTG CCGATCCTGA AACTGCTGCG GATGCAGCCG GCAGAACTCG TGAAGGTGTT TGCCGATGAG CGATAG
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Protein sequence | MKRALWVLAV LLSHWRRHPL QLATLLVGLI SATALWSGVQ ALNQQARVSY DRAASALGGA RTATLVGRDG ETLAQHIFVD LRRAGWPVSP LVEGRIQIGG RSLRLLGVEP LSLPIEASAA PAIGTSGLQG FLSPPGQALI APDTLAELKA AAGDTPQTNS GATLPPLTPQ NELVPGLLVV DIGVAQRLLN MPDKISRLLL GQRDLGPRAP LASVAGDTLR LVEPDAETDL ERLTDSFHLN LTAFGLLSFL VGLFIVNSAI GLAFEQRRPM LRTLRACGVS AFQLNSVLIV ELVALALLAG LIGLVCGYFI AATLLPDVAA SLRGLYGAQI PGQLSLRPQW WAAGIAISVI GALGAASASL LKAIRLPVLA AAQPYAWQQA QQTALVVQGA LALLVFAGGL GCLLLGDSLV AGFAVLAAIL LGAALALPAV LGLVLLISER AARKPLSKWF WADSRLQLSG LSLALMALLL ALAVNVGVGT MVQSFSKTFT GWLDGRLAAE VYLNAASDAQ AGEIKAWLRD RPEVQALLPG SRAEAQLGGW PIELIGFADH ATYREQWPLL ESTANAWDLV ARGEAALVSE QLARRLKLKL GDRVQVPTPQ GPWPLDVAAI YADYGNPRGQ LGVAIAPLVA HFPGIAQTRF GLRVTPAAVP ALVTALREKF ALDNRSLADQ TALKAESRKI FNRTFAVTNA LNAFTLGIAG VALLTSLLTL SQSRLPQLAP LWAIGITRRK LALIELMKTL SVALITALLA LPLGLVVAWC LIAVVNVKAF GWRLPFQVFP EQLVQLLGIA MLAALLAALL PILKLLRMQP AELVKVFADE R
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