Gene RPC_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0072 
Symbol 
ID3971405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp81209 
End bp81607 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID637923188 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_529970 
Protein GI90421600 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GGATCGAACG TCCGCTTTCG CCGCACATGC AAGCCTATCG CTGGAGCCTG 
ACGATGGCGT TGTCCATCGT GCACCGGCTC ACCGGCATTA CGCTTTATTT CGGAACGCTG
CTGCTGGCCT GGTGGCTGAT CGCCGTGGCG GCGGGGCCCA GCGCCTACGC CAATGTGCAG
GCCTTCACCG GTAGTTGGAT CGGCCGGCTG ATGCTGTTCG GCTATACTTG GTCGTTGATG
CATCACATGC TCAGCGGTGT GCGGCATTTC ATCTGGGATC TCGGCTACGG CTTCACCGCC
GCGGAACGCG AATCGATGAC CTGGGCGGCG CTGATCGGCG GCGTGGTGCT CACCGTGCTG
CTGTGGATCG TCGCTTTCAC GCTCGGAGGC GCACGATGA
 
Protein sequence
MTARIERPLS PHMQAYRWSL TMALSIVHRL TGITLYFGTL LLAWWLIAVA AGPSAYANVQ 
AFTGSWIGRL MLFGYTWSLM HHMLSGVRHF IWDLGYGFTA AERESMTWAA LIGGVVLTVL
LWIVAFTLGG AR