| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0068 |
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| Symbol | sdhB |
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| ID | 3971401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 77632 |
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| End bp | 78414 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637923184 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_529966 |
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| Protein GI | 90421596 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.450062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.500614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAAT TCTCGCTTCC GAAAAATTCC AAGGTCACCA GCGGCAAGAC CTGGCCGAAG
CCCGAGGGCG CGACCGAAAC CCGCGAATTC AAGGTGTATC GTTGGAATCC CGAGGACACC
AAGAATCCCA GCGTCGACAC CTACCACGTC AACACCCACG ACTGCGGGCC GATGGTGCTC
GACGGCCTGA TCTGGATCAA GAACAACATC GATCCGACGC TGACCTTCCG CCGCTCCTGC
CGCGAAGGCG TCTGCGGCTC CTGCGCGATG AACATCGACG GCGAGAACAC GCTGGCCTGC
ACCAAGGCGA TGGACGACGT GAAGGACAGT GCGGTCAAGA TCAATCCGTT GCCGCACCAG
CCGGTGGTCA AGGACCTGGT GCCAGATCTG ACCAATTTCT ACGCGCAATA CGCTTCCATC
GAGCCGTGGC TGCAGACCAT CACGCCGACG CCGCAGAAGG AATGGCGACA GACCCACGAG
GATCGCGCCA AGCTCGACGG GCTGTACGAG TGCATCCTGT GCGCCTGCTG CTCGACCTCG
TGCCCGAGCT ATTGGTGGAA TTCCGATCGC TTCCTCGGCC CGGCGGCGCT GTTGCAGGCC
ACCCGCTGGG TCAAGGACAG CCGCGACGAG GCCACCGGCG AGCGGCTCGA CAATCTCGAG
GATCCGTTCC GGATCTATCG CTGCCACACC ATCATGAATT GCGCCAAGGC CTGCCCGAAG
GGATTGAACC CGTCGGAAGC GATCGCCAAT CTGAAGTTGA AGCTGGTCGA ACGCCAGATC
TAA
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| Protein sequence | MVEFSLPKNS KVTSGKTWPK PEGATETREF KVYRWNPEDT KNPSVDTYHV NTHDCGPMVL
DGLIWIKNNI DPTLTFRRSC REGVCGSCAM NIDGENTLAC TKAMDDVKDS AVKINPLPHQ
PVVKDLVPDL TNFYAQYASI EPWLQTITPT PQKEWRQTHE DRAKLDGLYE CILCACCSTS
CPSYWWNSDR FLGPAALLQA TRWVKDSRDE ATGERLDNLE DPFRIYRCHT IMNCAKACPK
GLNPSEAIAN LKLKLVERQI
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