| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0065 |
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| Symbol | |
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| ID | 3971398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 74563 |
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| End bp | 76416 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637923181 |
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| Product | OmpA/MotB |
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| Protein accession | YP_529963 |
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| Protein GI | 90421593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.656472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.842902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAC TTCGCGTCGC GTTGCTTGCC ACCACCGCCC TGACGCTGGG CCAAATCGCA
GCGATGCCGT CGCATGCGCA AACCTCGCCG CAGCAGATGG CGCAGGCGCC CGCCGGCGAG
ACCGGGCCCG ACGGCAAGCC GGTCGTGAAA CAGCCACCGA AGGGTCCGCC GCCCGGCGCG
CCGCAGCGCC CGGCCGGTCC CGGCGGCGGA GCTGCGCCGC CCCAGGCACC GCCGCCGGCC
GCGGCTCCGC CCCGCGCCGA ACCGCCGGCG CGAACCGCGC CGCCGCCAGC TGCAACAGCT
CCGGCTGCCC CGCCGCCCGC TGCGGCACCG CGTCCGACGC CGCCGGCCGC CGCGCCTCCC
GAAGCTCCGC GCCGTCCGAC GCCGCCGCCC GCGGCCGCGC CGCAGCGCCC GACTGCTCCG
CCCGCTGCGA CCGCGCCGCA GCGACCAGCT GCCCCGACCC AACCGGCGCA ACCCTCGGCA
CCGACCGCTG CACCGCCGGC GGCCGTGACG CCGCCGCCGG GTGCTGCTCC GGCGCAACGC
TCCGCGCCGG GTGCCGGACC CGCCGAACGA CAGGGCTTGG AACGACGCGC CCCCGGCGCA
ACCGCTCCCG GGGCTCCGGC TCCCGGCGCC GCCGCGCCTG GCGCGCCGGC TGCTGCGCCC
ACCCCGAGTA CGGCACCGTC GCCTGCGCCA ACCCCCGCGC CAGGCCCCGG CGGCGGCGCT
GCGAGTCCGC CCGCGGCAGC TCCGGCACCG GCTGCCGGCG GCACACCGCC CAATAGCCCC
GGCGCGTCGC AGCGTGGCGC CGCATCGCCG GGCGGCGCGG CGGCGGCGCC TCCGCCGCCT
CCGACCGTCA CCGCGCCGAT CCCGCCGGCG CCGCCGCCGC CGCAAGCTTT GGCGCCGATC
GCGCCCGGCG CGGCAGCTCC CGGCCCGCGC AACCTGGCCG ACTTCCGCAA CCAGCGCCGC
GAAGTCCAGG AAGGCGGCCG TACGGTGATC ACCGAGCCCG GCCGCGTCAT CATCCGCGAT
CCCGGCGGGC AGGCATTCAT CCGGCACAAC GAGGTCGATC GCTTCCGCTA TGGTGCGCGC
GATATTCGGG TGCAGCAGGT CGGCGATGAA AGCCGCACCA TCGTGGTCCG TCCCGATGGT
TCGGAGATCA TCACCGTCAA CGGCCGCGAC GGTCAGTTGC TGCGCCGGAT CCGCCGCGAC
CGCGAGGGCC GCGAGATCAT CATCATCGAC AACTCGTATC GCGAGCCGCG CGACCGCGGC
AGCTTCTACG TCGATCTGCC GCCGCCGGTG CTGCGGATTC CGCGGAACCG CTACATCGTC
GATTATGAAG ACGCTTCGCC GGAGCTGATC TACGAGACGC TGGAAGCGCC GCCGGTGGAG
CGGATCGAGC GACGCTATTC GCTCGACGAA ATCCGCTACA GCGCCGGCGT CCGGCAGCGG
ATGCCGAGCA TCGATCTCGA CACCATCACC TTCGAACTGG GCTCGTGGGA GATTCCGCCC
GACCAGGCCG CGAAGCTGCA GGCGATCGCC GACGGCTTGA ACAAGTCGAT CGCACGCAAC
CCGCGCGAGG TGTTCCTGAT CGAGGGCCAT ACCGACGCCG TCGGCAACGA CACCGACAAT
CTGTCGCTGT CGGATCGCCG CGCCGAGGCC GCCGCGCAAC TGCTCACTCA GCAGTTCGGG
GTGCCGGCGG AAAACCTGAC GTCGCAGGGC TATGGCGAGC AGTATCTGAA GGTGCCGACG
CAGGCGCCGG AACGTCAGAA CCGCCGGGTC ACCGTGCGCC GCATCACGCC GCTGCTCAAC
GGCGGCACCG CGTCGCTGCC GCCGCCGCCG CCCGGCGTCG CCCCGCCGCG CTGA
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| Protein sequence | MITLRVALLA TTALTLGQIA AMPSHAQTSP QQMAQAPAGE TGPDGKPVVK QPPKGPPPGA
PQRPAGPGGG AAPPQAPPPA AAPPRAEPPA RTAPPPAATA PAAPPPAAAP RPTPPAAAPP
EAPRRPTPPP AAAPQRPTAP PAATAPQRPA APTQPAQPSA PTAAPPAAVT PPPGAAPAQR
SAPGAGPAER QGLERRAPGA TAPGAPAPGA AAPGAPAAAP TPSTAPSPAP TPAPGPGGGA
ASPPAAAPAP AAGGTPPNSP GASQRGAASP GGAAAAPPPP PTVTAPIPPA PPPPQALAPI
APGAAAPGPR NLADFRNQRR EVQEGGRTVI TEPGRVIIRD PGGQAFIRHN EVDRFRYGAR
DIRVQQVGDE SRTIVVRPDG SEIITVNGRD GQLLRRIRRD REGREIIIID NSYREPRDRG
SFYVDLPPPV LRIPRNRYIV DYEDASPELI YETLEAPPVE RIERRYSLDE IRYSAGVRQR
MPSIDLDTIT FELGSWEIPP DQAAKLQAIA DGLNKSIARN PREVFLIEGH TDAVGNDTDN
LSLSDRRAEA AAQLLTQQFG VPAENLTSQG YGEQYLKVPT QAPERQNRRV TVRRITPLLN
GGTASLPPPP PGVAPPR
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