Gene RPC_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0056 
Symbol 
ID3971388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp64314 
End bp65096 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID637923171 
Productglutamine amidotransferase 
Protein accessionYP_529954 
Protein GI90421584 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTCC CGACCGCGGT CTTGCCGGCG TCGATTGCGC CGCACGTTGC CGATCTGCGG 
CCGGTGCTGA TCATTCTGCA TCAGGAAATG TCGACGCCCG GGCGGGTCGG CAACGCGCTG
CGGCTGCTCG GCCATCCGCT CGACGTCCGC CGTCCGCGAT TCGGCGATCC GTTGCCGGCG
ACGCTGGAGC ATCACGCCGG GGCGGTGATT TTCGGCGGTC CGATGAGCGC CAACGACCCC
GACGACTTCG TCCGCCGCGA GATCGACTGG ATCGCGGTGC CGCTGAAGGA AGATCGGCCG
TTTCTGGGCA TCTGCCTCGG CGCCCAGATG CTGGCGGTGC AACTCGGGGC GAGGGTGGCG
CCGCACGCCG AAGGCCGCGC GCAGATCGGC TATTACCCGA TCCGCCCCAC CGCAGCCGGC
CGCGCGATCT GCGCCGACTG GCCGGAGCAA GTCTATCATT GGCATCGCGA AGGCTTCGAT
TTGCCGGTCG ACGCCGAATT GCTGGCCGAA GGCAGCGATT TCCCGGTCGA GGCGTTCCGC
GCCGGCCATG CCTTCGGCTT CCAGTTTCAT CCCGACGTCA CCTACGCGAT GATGCATCGC
TGGACCACGC GCGGCCACGC CCGCATGGAT CTGCCCGGTG CCCGCCCGCG CCACGATCAC
TTCAGCGACC GCGCCGTCCA CGACGTCGCC GAACGCGCCT GGCTGCGCGA ATTTCTCAAT
GTCTGGCTGG CGCAGATGCC GCTGATCGTG CCCGACGCCG GGATGGCGCA AGCGGCGGAA
TAG
 
Protein sequence
MRLPTAVLPA SIAPHVADLR PVLIILHQEM STPGRVGNAL RLLGHPLDVR RPRFGDPLPA 
TLEHHAGAVI FGGPMSANDP DDFVRREIDW IAVPLKEDRP FLGICLGAQM LAVQLGARVA
PHAEGRAQIG YYPIRPTAAG RAICADWPEQ VYHWHREGFD LPVDAELLAE GSDFPVEAFR
AGHAFGFQFH PDVTYAMMHR WTTRGHARMD LPGARPRHDH FSDRAVHDVA ERAWLREFLN
VWLAQMPLIV PDAGMAQAAE