| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0055 |
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| Symbol | |
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| ID | 3971443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 63376 |
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| End bp | 64155 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923170 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_529953 |
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| Protein GI | 90421583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAAC GCGTGACGTT GATAACCGGT GCCTCGGCTG GTATCGGCAC CGAACTGGCG
CGTGTCTTTG CGTCTCATCA TCATCGGGTG GCTCTGGTCG CGCGCCGGGA GGAGCGGCTG
AATACGCTGG CGGAGGAGAT CGTCGCGGCC GGCGGCGCCA AGCCGCTGGT GATCGCTTGT
GATTTGCGCC AGCCCGATGC CGGCGACGCC ATCGCGGCGG CGCTCACTGA GGCCGGCGTC
GAGGTCGAAT ACCTGGTCAA CAATGCCGGC TATGGATTGT TCGGCCAGGC CACCGAGCTC
GATCGCGGCG CCCAGCTCGG CATGATCGAC CTCAATGTCC GGGCGCTGAC CGACTTGTCG
CTGCGGTTTT CCGCCAGCGT GATCAAGCAT CACGGCGGCA TTCTCAACGT CGCCTCGATC
GCCGGATTCC TGCCCGGACC CGGCATGGCG GTGTACTACG CCTCCAAGGC GTTCGTGCTG
TCGTTTACCG AGGCATTGCG CGCCGAACTC GGCCGTCACG GCGTGCGCGT CACCGCGCTG
TGTCCGGGTC CGGTGCTGAC CGAATTCCAA CAGCATGCCG GATTCGAGCC GGGCTTCGAC
AGCGCGATCC TCAATGTCTC GGCGGCGGAT GTCGCCCGCC AGGGCTTCGA GGGGCTGATG
GCCAACAAGC GCGCGGTGCT GCCGGGGCTC GGCATCAAGA TCGTGCCGCT GCTGCTGCGG
TTGTTTCCCC GCGGCTTCGT GCTGGCGGGC GTCGGGAAAT TTCAACTGCG GCGACGCTAA
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| Protein sequence | MTERVTLITG ASAGIGTELA RVFASHHHRV ALVARREERL NTLAEEIVAA GGAKPLVIAC
DLRQPDAGDA IAAALTEAGV EVEYLVNNAG YGLFGQATEL DRGAQLGMID LNVRALTDLS
LRFSASVIKH HGGILNVASI AGFLPGPGMA VYYASKAFVL SFTEALRAEL GRHGVRVTAL
CPGPVLTEFQ QHAGFEPGFD SAILNVSAAD VARQGFEGLM ANKRAVLPGL GIKIVPLLLR
LFPRGFVLAG VGKFQLRRR
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