Gene RPC_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0037 
Symbol 
ID3971462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp42455 
End bp43429 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID637923151 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_529935 
Protein GI90421565 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTG TTCTGTGCTC CGAATATTGC GGCCCCGACG ATCTGGTGCT CGCCGACATC 
GCCGATCCTG TTGCCGGCCC CGGCGAAGCG GTGATTGCGA TTAAAGCCGC GGCGCTGAAT
TTCTTCGACA TCCTGATGAT CCAGGGCAAG TACCAGATCA AACCGCCGTT CCCGTTCTCG
CCCGCGGCCG AAGTTGCCGG CGTCATCGAG AGCTTGGGCG ACGGCGTCAG CGATCTGAAA
GTCGGCGACC GCGTGGTGGC GTCCTGCGGT TTCAACGGCG CGCGCGACAA GATCGCACTG
CCGGCTCAGT CGATCGTGAA GATCCCCGAC AACCTCGATT TCGACCGCGC CGCGGGCATC
ATCATCACCT ACGGCACCGC GCTGCATGCG CTGGAGGACC GCGCACACCC GAAGCCCGGC
GAGACGCTGG CGGTGCTGGG AGCAGCCGGC GGCACCGGCT TGGCCGCCTG CGAACTAGGC
AAGTTGATGG GGCTGAAGGT GATCGCCTGC GCCTCCTCCG ACGCCAAGCT CGACTTCGCC
AAACAACACG GCGCCGAATT GACGCTGAAC TACGCCGCCG AGGATTTGAA AGACGGCCTG
AAGCGGCTGA CCGAAGGCCG CGGCGCCGAT ATCATCTTCG ATCCGGTCGG AGGCAGCTAT
GCCGAAGCAG CACTACGCGC GATCGCCTGG GAAGGCCGCT TCCTGGTGAT CGGCTTTGCC
GCCGGCGAGA TTCCCAAGAT GCCGCTCAAC CTGGCGCTGC TCAAGGGTTG CGACATCCGC
GGCGTGTTCT GGGGCGCCTG GGCCAAGCTC AACCCGGCGA AGAACCGCGC CAATCTGGAA
AAGCTGGTGC AATGGACCGC CGAGGGCAAG ATCTCCTCGC ATGTCGACCG CAGCTTCCCG
CTGGCGCAGA CCGCCGACGC GCTGAAGGTG CTGGCCGGAC GCCAGGCGAT GGGCAAGGTG
ATCCTGCATC CGTAG
 
Protein sequence
MKAVLCSEYC GPDDLVLADI ADPVAGPGEA VIAIKAAALN FFDILMIQGK YQIKPPFPFS 
PAAEVAGVIE SLGDGVSDLK VGDRVVASCG FNGARDKIAL PAQSIVKIPD NLDFDRAAGI
IITYGTALHA LEDRAHPKPG ETLAVLGAAG GTGLAACELG KLMGLKVIAC ASSDAKLDFA
KQHGAELTLN YAAEDLKDGL KRLTEGRGAD IIFDPVGGSY AEAALRAIAW EGRFLVIGFA
AGEIPKMPLN LALLKGCDIR GVFWGAWAKL NPAKNRANLE KLVQWTAEGK ISSHVDRSFP
LAQTADALKV LAGRQAMGKV ILHP