| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0035 |
|---|
| Symbol | |
|---|
| ID | 3971460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 40102 |
|---|
| End bp | 41301 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_529933 |
|---|
| Protein GI | 90421563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGT CGACTTCCCA GTCCCTGCTC GAAAAGACCG CGCTGGAAAC CTATGTGCCG
CCGGCGAGAC CGTCGCTGAT CGGGCTGTCG CGCGCGGAAC TCGCCGAGGC GCTGGGCGGC
ATCGGCGTCG CGGCGTCGCA GCGCAAGATG CGGGCGCAGC AGCTGTGGCA CTGGATGTAT
TTTCGCGGGG TTCAGGAATT CGCCGAAATG ACGAGCATCT CCAAGGAGAT GCGCAGCCAG
CTCGCGGAGC ATTTCACGGT GGCGCGGCCG GAAGTGGTGG CCGAGCAGAT CTCCAATGAC
GGCACCCGGA AGTGGCTGCT GCGGCTGCCG AGCGGCGTCA GCGGCGAAAA GGCCCATGAG
GTCGAGTGCG TCTACATCCC GGAGACCGAC CGCGGCACGT TATGCGTGTC CTCGCAAGTC
GGCTGCACGC TGAATTGCTC GTTCTGCCAC ACCGGCACCC AGAAACTGGT GCGCAACCTC
ACCGCCGGCG AGATCGTCGG CCAAGTCATG GTCGCGCGCG ACCGGCTGAA TGATTGGGCG
GATCGCGAGA CTCCGAACGG CAACCGCCTG GTCACCAACG TGGTGATGAT GGGAATGGGC
GAGCCGCTGT ACAATTTCGA CGCGGTGCGC GACGCGCTGT TGATCGTCTC CGACAATGAA
GGCATCGGCA TTTCGCGGCG CCGGGTGACG CTATCGACCT CCGGCGTGGT GCCGAACATC
GTGCGTGCCG GCGAAGAGAT CGGCGTGATG CTGGCGATTT CGCTGCATGC GGTGCGCGAC
GAATTGCGCG ACGAGCTGGT GCCGCTGAAC CGGAAATACC CGCTGGCGGA ACTGCTGCAG
GCCTGCCGCG ACTATCCCGG CGCTTCCAAT GCGCGGCGCA TCACCTTCGA ATATGTGATG
CTGAAGGACG TCAACGACTC GCTCGACGAC GCCAAGCTGT TGGTCAAGCT GCTGAGCGGG
ATCCCGGCCA AGATCAACCT GATCCCGTTC AACCCGTGGC CGGGCACCGC CTACAAATGC
TCGGACTGGG ACCAGATCGA AAAGTTCTCC GAATACATCT TCAACGCCGG CTATTCCTCG
CCGGTGCGCA CGCCGCGCGG CCGCGACATT CTCGCCGCCT GCGGGCAGTT GAAGTCCGAA
ACCGAGAAGC TGACGGCGCG CGAACGCGAG GCGCTGCGCG CGATGGCGAT GACGGATTGA
|
|---|
| Protein sequence | MTLSTSQSLL EKTALETYVP PARPSLIGLS RAELAEALGG IGVAASQRKM RAQQLWHWMY
FRGVQEFAEM TSISKEMRSQ LAEHFTVARP EVVAEQISND GTRKWLLRLP SGVSGEKAHE
VECVYIPETD RGTLCVSSQV GCTLNCSFCH TGTQKLVRNL TAGEIVGQVM VARDRLNDWA
DRETPNGNRL VTNVVMMGMG EPLYNFDAVR DALLIVSDNE GIGISRRRVT LSTSGVVPNI
VRAGEEIGVM LAISLHAVRD ELRDELVPLN RKYPLAELLQ ACRDYPGASN ARRITFEYVM
LKDVNDSLDD AKLLVKLLSG IPAKINLIPF NPWPGTAYKC SDWDQIEKFS EYIFNAGYSS
PVRTPRGRDI LAACGQLKSE TEKLTARERE ALRAMAMTD
|
|---|
| |