Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0021 |
Symbol | |
ID | 3971446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 24297 |
End bp | 26057 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637923135 |
Product | gamma-glutamyltransferase |
Protein accession | YP_529919 |
Protein GI | 90421549 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.546306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGATTAA GTCCGCCGAG GTCGCGCTGC ATTCTGGCGC TGCTGCGTGG CGTAGTGGTG ACGGCGCTGC TCGCGCTCGC CGGCGCAAGC GCGCAAGCCC AGGACATTCG CGGCGGCGCG CTGCCGGCGG TCGCCGCGCC CGCGGTGGTC GGCTCGCGCG GCATGGTGGT TGCGCAGGAG CGCATCGCCG CAACAATCGG CCGCGATGTC TTGGCGAAGG GCGGCAACGC CGTGGATGCC GCTGTGGCAA CCGGGTTCGC GATGGCCGTG ACTTATCCCC GCGCGGGAAA TCTCGGCGGC GGCGGCTTCA TGGTGATCCA CCGCGCCAAA CAAAACGACG ACATCGCGCT GGACTATCGC GAGACCGCGC CGGCGGCGGC GACGCGCGAC ATGTTCCTCG GCGCCGACGG CAAGCCCGAT CCGGCGAAGT CGCGCGACTC CGCGCTCGGC ATCGGCGTGC CCGGCACCGT CGCAGGGCTT GCGCTGGCGC TGGAGAAATA CGGCTCCGGC AAATTCTCGT TGGCGGAGAT TCTGCAGCCG ACGATCGCGC TGGCGCGCGA CGGCTTCGAG ATTGCCGACG ACACCGCCGA TACGCTGCCG GATTGGCACA AGCGGTTGGC GCGTTGGCCG GCGACGCAGA AGATTTTTTC GCGGGACGAC GGCACCTCGC TGCAGGGCGG CGACCGCCTG GTGCAGCGCG ATCTCGCCGT GACGCTCGGC GCGATCGCCG CGCAGGGGCA GCGCGGCTTC TATCAGGGCG AGGTCGCGGA AAAGCTCGCG CGTGGCATCG CCGCGGCCGG CGGCCTCATC ACCGTGGACG ACCTTAAATC CTATCAGCCG GTGATCCGCA CGCCGCTGCG CGGGACTTAT CGCGGCTATG ACATCGTGGC GATGCCGCTG CCGTCGTCCG GCGGCACCGT GCTGATCGAG ACGCTGAACC TTCTCGAGGG CTTTCAACTG CGCGAACTTC CGCAAGGCTC GGCCGCCTCG TTGCATCTTC TCATCGAGGC GATGAAGCGC GGCTATGCCG ACCGCGCGCG CTATCTCGGT GATCCGGCTT TCGTCAACGC GCCGCTCGCG GCGTTGCTAT CAAAGGACTA TGCGAAGAAG CAGCGTGCCG GCATCGATCC GCAGCGCGCC ACGCCGTGGA CCGAAGCCCT GCCGGCGCTG CCGCCGCGCG AGGGCGAAAA CACCACGCAT TACTCGGTGG TTGACGCCGA CGGCAACGCG GTCAGCAACA CTTACACGCT GAATTTCAGC TACGGGATCG GCCTGATCGC CGCCGGCACC GGCGTGCTGC TCAACAACGA GCTCGACGAT TTCACCGCGG CGCCGGGTGC CTCGAACGCG TTCGGGCTGG TCGGCTTCGA GGCCAATCTG CCGGGGCCGG GCAAACGGCC GTTGTCGTCG ATGTCGCCGA CGCTGGTGCT GAAGGACGGC CGCGTGGTGC TGGTCACCGG CTCGCCCGGC GGCAGCCGGA TCATTTCGAC AACGCTGCAG GTGATCGTCG ACGTGCTGGA TTACGACATG GATATCGCCG CCGCGGTGGC GGCGCCGCGG CTGCATCATC AATGGCTGCC GGATGAGGTG CGAATCGAGC AGGGATTTCC TGAAGCTGTG ATCGCCGCGC TGCGCGCCAA GGGCCACGTC GTCGTGGCGC CGCTCGGCCA GACCTCGGCG AATTCGATTT TCGTGGCTAA GGACGGCGTC CGCGGCGCGC CCGACCCGCG GACCCGCGGC GCCGCGGCGG TCGCGGAGTA G
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Protein sequence | MRLSPPRSRC ILALLRGVVV TALLALAGAS AQAQDIRGGA LPAVAAPAVV GSRGMVVAQE RIAATIGRDV LAKGGNAVDA AVATGFAMAV TYPRAGNLGG GGFMVIHRAK QNDDIALDYR ETAPAAATRD MFLGADGKPD PAKSRDSALG IGVPGTVAGL ALALEKYGSG KFSLAEILQP TIALARDGFE IADDTADTLP DWHKRLARWP ATQKIFSRDD GTSLQGGDRL VQRDLAVTLG AIAAQGQRGF YQGEVAEKLA RGIAAAGGLI TVDDLKSYQP VIRTPLRGTY RGYDIVAMPL PSSGGTVLIE TLNLLEGFQL RELPQGSAAS LHLLIEAMKR GYADRARYLG DPAFVNAPLA ALLSKDYAKK QRAGIDPQRA TPWTEALPAL PPREGENTTH YSVVDADGNA VSNTYTLNFS YGIGLIAAGT GVLLNNELDD FTAAPGASNA FGLVGFEANL PGPGKRPLSS MSPTLVLKDG RVVLVTGSPG GSRIISTTLQ VIVDVLDYDM DIAAAVAAPR LHHQWLPDEV RIEQGFPEAV IAALRAKGHV VVAPLGQTSA NSIFVAKDGV RGAPDPRTRG AAAVAE
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