| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0020 |
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| Symbol | |
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| ID | 3971445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 23282 |
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| End bp | 24178 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923134 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_529918 |
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| Protein GI | 90421548 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAC TGAAGGGCAA GACGCTGTTC ATTTCCGGCG GCAGCCGCGG CATTGGGCTG
GCGATCGCGC TACGTGCGGC GCGCGACGGC GCCAATGTGG CGATCGCCGC CAAGACCGCC
GAGCCACATC CCAAACTCCA GGGCACGATC TATACCGCGG CGGACGAGGT GCGCGCCGCC
GGCGGCAACG CGCTGCCGAT CCTGTGCGAC ATCCGCGACG AGGCCCAGGT GATCGCCGCG
ATCGACAAGA CGGTCGGCGA GTTCGGCGGC CTCGATATCT GCGTCAACAA TGCCTCTGCG
ATCAGTCTCA CCAACTCACA AAATACCGAC ATGAAGCGGT TCGACCTGAT GATGGGGATC
AACACCCGCG GCACCTTCAT GGTGTCGAAA TATTGCATTC CGCATCTGAA GAAGGCCGAG
AACCCGCACA TCCTGATGCT GTCGCCGCCG CTCGACATGA AGCCAAAATG GTTCGAGCAC
TCCACCGCCT ACACCTTGGC CAAGTTCGGC ATGAGCATGT GCGTGCTGGG ATTGTCCGGC
GAACAAAAGC GCGCCGGCAT CGCCGTCAAC GCGCTGTGGC CGCGCACCAC CATCGCCACC
GCGGCGGTCG GCAATCTCTT GGGCGGCGAC GCCATGATGC GCGCCAGCCG GACGCCGGAG
ATCATGGGCG ACGCGGCCTA TGAGATCTTT CTCAAGCCGT CGCGCGAGTT CACCGGGCAG
TTCTGCATCG ACGACAAAGT GCTGTATGAA GCGGGCGTCA CCGATTTCGA GCGCTACCGC
GTCGATCCCT CGGTGCCCCT GATGTCGGAT TTCTTCGTGC CCGACGACGA TGTGCCGCCG
CCCGGCGTCA GCGTGAGGAC GCTGCCCTCG GTCGATGCGG CGAAGGCGAA GGGGTAG
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| Protein sequence | MASLKGKTLF ISGGSRGIGL AIALRAARDG ANVAIAAKTA EPHPKLQGTI YTAADEVRAA
GGNALPILCD IRDEAQVIAA IDKTVGEFGG LDICVNNASA ISLTNSQNTD MKRFDLMMGI
NTRGTFMVSK YCIPHLKKAE NPHILMLSPP LDMKPKWFEH STAYTLAKFG MSMCVLGLSG
EQKRAGIAVN ALWPRTTIAT AAVGNLLGGD AMMRASRTPE IMGDAAYEIF LKPSREFTGQ
FCIDDKVLYE AGVTDFERYR VDPSVPLMSD FFVPDDDVPP PGVSVRTLPS VDAAKAKG
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