Gene RPC_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0018 
Symbol 
ID3969443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp21556 
End bp22167 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content60% 
IMG OID637923132 
ProductDSBA oxidoreductase 
Protein accessionYP_529916 
Protein GI90421546 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CGCCGCCGCA ATTCTTGTTC GATTTCGGTA GCCCGAACGC CTATCTGGCG 
CATCAGGCGA TCCCTGAAAT CGAACGCCGG ATCGGCGTAA AATTCGACTA CGTGCCAGTG
CTGCTCGGCG GCATCTTCAA GGCCACCAAC AACAAATCAC CGGCGGAGAC GTTGGCCGGG
ATCAAGAACA AGCGCGAGTT TCATGAGCTG GAAACCCAGC GTTTCATCCG GCGCTACCAC
GTCGAGCCCT ATGTGTGGAA TCCGCACTTT CCGGTTAACA CGCTGAACTT GATGCGCGCC
GCGGTGGCGG CACAGTTGGA CGGCGTGTTC GAGCCATATA TCGCAGCCGC GTTCCGTCAC
ATGTGGGCGG AGCCGAAGAA GATGGATGAT CCCGAGCTGG CGTTGCAGGC GTTGAAAGCG
TCGGGGCTCG ATGCGGACAA GCTGTTCGCG CGGGCGCAGC AGCCGGAGGT CAAGGCCAAA
CTGATCGACA ACACCCAACG CGCGGTGGAG CGCGGCGCGT TCGGTGCGCC GACCTTCTTC
GTCGGCGACG AGATGTTCTT CGGCAAGGAG CAACTGCGCG AGGTCGAGGA AATGTATGGG
GAGTTGGATT GA
 
Protein sequence
MSQPPPQFLF DFGSPNAYLA HQAIPEIERR IGVKFDYVPV LLGGIFKATN NKSPAETLAG 
IKNKREFHEL ETQRFIRRYH VEPYVWNPHF PVNTLNLMRA AVAAQLDGVF EPYIAAAFRH
MWAEPKKMDD PELALQALKA SGLDADKLFA RAQQPEVKAK LIDNTQRAVE RGAFGAPTFF
VGDEMFFGKE QLREVEEMYG ELD