Gene RPC_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0016 
Symbol 
ID3969441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp19586 
End bp20509 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content68% 
IMG OID637923130 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_529914 
Protein GI90421544 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAC TCGTGGTCGG CGCCGGAGCG ATCGGCGGCT ATTTCGGCGG ACGGCTGCTG 
CAGGCCGGGC GCGATGTGAC GTTCCTGGTG CGGCCGAAAC GCGCCGCCGA ACTGCAAACG
CACGGCCTGG TGATCAACAG CCCGCACGGC GACGTCACGC TGCGAGACCC GCCGGTCGTC
CTGGCGACGG AGTTGAATCA GCCGTTCGAT CTGATCCTGC TGAGCTGCAA GGCATTCGAT
CTCGACGATG CCATCGCCTC GTTCGCGCCG GCGGTCGGTC CCGGCACCGC GATCCTGCCA
CTGCTCAACG GCATCGCGCA TCTCGACGTG CTGGACCGCA AATTCGGCGC CGACCGGGTG
CTCGGCGGGC AATGCGTGGT GGCGGCGACG CTGAACGCCG TGCGCCAGGT CGTGCAGCTC
AACCCGATGC ATTCCATCAC CTTCGGCGAG CGCGACGGCA CGGTCTCGGC CCGGGTCGAG
GCGATCGCCG CGATCCTGTC CGGGGCGATG TTCGAGGTTC ACGCCTCGCC GCTCATCCTG
CAGGAGATGT GGGAAAAATG GGTGTTTCTG GCGACGCTGG CCGGGGCGAC CTGCGCGATG
CGGGCGACGG TCGGCAACGT GCTGGCAGCG CCGGGCGGCG CCGATTTCAT CCTCGGCGTG
CTCGACGAAT GCACCGCGGT GGCCTCTGCC TCAGGCTATG CGCCGCGCGG ACCGTTTCTG
GAGCGGACCC GCGGCATGGT GACGGCGGCC GGTTCGCCGC TAACGGCCTC GATGTTCCGC
GACATCCAAG CCGGCGCGCC GATCGAATCG GAGCACGTGA TCGGCGATCT GATCGCGCGC
GGCGACGCCG CCAAGACCCC TTTACCGCGA CTGCGCGTCA TCTTCACGCA TTTGCAGGCC
TATCAGTTGC AGCGTGGCGG ATAG
 
Protein sequence
MRILVVGAGA IGGYFGGRLL QAGRDVTFLV RPKRAAELQT HGLVINSPHG DVTLRDPPVV 
LATELNQPFD LILLSCKAFD LDDAIASFAP AVGPGTAILP LLNGIAHLDV LDRKFGADRV
LGGQCVVAAT LNAVRQVVQL NPMHSITFGE RDGTVSARVE AIAAILSGAM FEVHASPLIL
QEMWEKWVFL ATLAGATCAM RATVGNVLAA PGGADFILGV LDECTAVASA SGYAPRGPFL
ERTRGMVTAA GSPLTASMFR DIQAGAPIES EHVIGDLIAR GDAAKTPLPR LRVIFTHLQA
YQLQRGG