Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0012 |
Symbol | |
ID | 3969437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 15869 |
End bp | 16750 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923126 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_529910 |
Protein GI | 90421540 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAGC ACGACAAGCA CGGAACGTTC GACGAAGTCA CCGGCAAGCA CACCACCGGC CACGAGTGGG ACGGCATCGA GGAACTCAAC ACGCCGCTGC CGCGCTGGTG GGTACTGACC TTCTATGCCT GCATCATCTG GTCGTTCGCC TATTGGGCGG TGTATCCGGC CTGGCCGCTG GTGCAGAGCT ATACCACCGG CTGGTTCAAC TATTCGTCGC GCGCCGAAGT CGCGGTGGAA CTCGGCAAGC TCGAGGCGAT CCGCGGCGAC AAGATGGCGG CGCTGGCCAC CGCGCCGCTC GCCGACATCG AAAAGGACCC CGGCATGTTC GCGATGGCGC GCGCCCGCGG CAAGGCGGTG TTCGGCGACA ATTGCGCCGC CTGCCATGGC AGCGGCGGCG CCGGCTCCAA GGGCTTCCCC AACCTCAACG ACGACGACTG GCTGTGGGGC GGCACCCTCG AGCAGATCGA GCAGACCCTG AAATACGGCG CCCGCAACGG TCATCCGGAA GCGCATGAGG GCCAGATGCT GGCGTTCGGC AAGGAAGGCG TGCTGAAGCC CGAGGAGATC GCCACGGTAG CCAATTACGT GCGATCGCTG TCCGGCCTGT CGACCCGGCC CGGCGTCGAT GTCGCGGCAG GCGGCAAGAT CTTCGCGGAG AACTGCACCG TCTGTCACGG CGAGGACGCC AAGGGCAATC CGGATATCGG CGCGCCGAAC CTGACCGACC GGATCTGGCT GTACGGCTCC GAAGAGGCCA CCATCATCGA GACCATCACC AACGGTCGGG CCGGCGTGAT GCCGGCTTGG ATTGATCGGC TCGACCCTGG TACGATCAAG GCGATGGCGG TGTACGTACA TTCCCTCGGT GGCGGCAAGT AA
|
Protein sequence | MAEHDKHGTF DEVTGKHTTG HEWDGIEELN TPLPRWWVLT FYACIIWSFA YWAVYPAWPL VQSYTTGWFN YSSRAEVAVE LGKLEAIRGD KMAALATAPL ADIEKDPGMF AMARARGKAV FGDNCAACHG SGGAGSKGFP NLNDDDWLWG GTLEQIEQTL KYGARNGHPE AHEGQMLAFG KEGVLKPEEI ATVANYVRSL SGLSTRPGVD VAAGGKIFAE NCTVCHGEDA KGNPDIGAPN LTDRIWLYGS EEATIIETIT NGRAGVMPAW IDRLDPGTIK AMAVYVHSLG GGK
|
| |