Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0003 |
Symbol | recF |
ID | 3969428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3768 |
End bp | 4907 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637923117 |
Product | recombination protein F |
Protein accession | YP_529901 |
Protein GI | 90421531 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCT CAAAGATCCA TCGCCTGACG CTGACGCATT TCCGCAATTA TCGCGCGGCG AGCGTGACGG TGCGCGGCGA CGTCGTGGTG CTGGTGGGGC CGAACGGCGC TGGCAAGACC AATTGCCTGG AGGCGATCTC GCTGTTGTCG CCGGGCCGCG GCTTGCGCCG CGCCACGCTC GACGACATCG CCGACAACCA TGGCGATGGC TCCTGGGCGG TCTCCGCCGA AGTCGAAGGC GCGCTCGGCC TCGCCACGCT CGGCACCGGC ATCGATCCGC GCACCGAGGC CGCCGCGACC ACAAGGCGCT GCCGGATCGA CCGCGAGAAT GTCGGCTCGG CGGCGGCGTT CGGCGATCAT CTGCGGATGG TGTGGCTGAC GCCGGCGATG GACGGGCTGT TTCTCGGCGC GGCCTCCGAG CGGCGGCGGT TCTTCGACCG GCTGGTGCTG GCGATCGACA GCCAGCATTC CTCGCGCGTT TCCGCACTCG ACCGCAGCCT GCGTTCGCGC AACCGGCTGC TGGAGCAGCG CAGCCACGAT AGCCACTGGC TGGATGCGAT CGAGCGCGAA ACCGCCGAAC TCGCGGTCGC GGTGGCGGCA ATGCGCGGCG AGACCGTGAC CCGGCTCGCC GCGGCCCTGG CGCAACGCAG CGCCGACTCG GCGTTTCCGT CGGCGACCAT CGCGCTCGAC GGCTGGATGG AAAACGCGCT TCGTTCCGAG CCCGCCACCG CGGTGGAAGA CCGCTATCGC ACCTCATTGC GCGACAACCG CGCGCGCGAC GCCGCCGCCG GACGCACCTT GGACGGTCCG CATCTCACCG ATCTGCGGGT GATCTACACG CCGAAGAACA TGCCGGCGCG GGACGCCTCC ACCGGCGAAC AGAAGGCGCT GCTGATCGGC CTGGTGCTGG CGCACGCTTA CCTGGTCGCC GAGATGACCG GCATCACGCC GCTGTTGCTA CTCGACGAGG TGGTGGCGCA TCTCGATCCG TCTCGCCGCA AGGCGCTGTT CGGCGAATTG GCGCGACTCG GCGCGCAGGT CTGGATGACC GGCGCCGACC CCGCGGCGTT CGTCGATCTC GGCGAAGGCG GCGAGCTGTT CGAGGTCGAT AACGGCCGCA TCGCGCCGCA CGGCGGTTAG
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Protein sequence | MTVSKIHRLT LTHFRNYRAA SVTVRGDVVV LVGPNGAGKT NCLEAISLLS PGRGLRRATL DDIADNHGDG SWAVSAEVEG ALGLATLGTG IDPRTEAAAT TRRCRIDREN VGSAAAFGDH LRMVWLTPAM DGLFLGAASE RRRFFDRLVL AIDSQHSSRV SALDRSLRSR NRLLEQRSHD SHWLDAIERE TAELAVAVAA MRGETVTRLA AALAQRSADS AFPSATIALD GWMENALRSE PATAVEDRYR TSLRDNRARD AAAGRTLDGP HLTDLRVIYT PKNMPARDAS TGEQKALLIG LVLAHAYLVA EMTGITPLLL LDEVVAHLDP SRRKALFGEL ARLGAQVWMT GADPAAFVDL GEGGELFEVD NGRIAPHGG
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