Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0002 |
Symbol | |
ID | 3969427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2475 |
End bp | 3593 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923116 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_529900 |
Protein GI | 90421530 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGTCA CCGTCGAACG CGCGCAACTG TTGAAATCGC TGGGCCACGT CCATCGCGTA GTCGAGCGGC GAAACACGAT TCCGATCCTC GGCAACGTGC TGCTGCGCGC CGAAAAGGGC CGGCTGTCGC TGAAGGCGAC CGACCTCGAC CTCGAGGTCA CCGAAACCCT GCCGGCGGAG ACCGCAACCG GCGGCTCCAC CACGGTGCCG GCGCACATGT TCTACGACAT CGTCCGCAAG CTGCCGGACG GCTCGCAGAT CGTGCTGGAA AGCGACGGCG AGCGCGCCGT ACTGGCGATT CGCGCCGGGC GCTCGCGCTT TACGCTGCAG ACCCTGCCGG AAAACGACTT CCCCGATCTC GCCGCCGGCG AGATGACGCA TTCCTTCACG CTCACCGCCG CCGACGTCAA ACGGCTGATC GATCGCACCC AGTTCGCGAT CTCCACCGAA GAGACCCGCT ACTACCTCAA CGGCATTTAT CTGCACGGCG CCGGCACCGC TGCGGCGGCG ACGCTGCGCG CGGTCGCCAC CGATGGCCAT CGTTTGGCGC AGGTCGACCT GCCGCTGCCC TCGGGCGCCG CCGGCATGCC CGGGGTGATC GTGCCGCGCA AGACGGTGGG CGAAGTGCAG CGCTTGATCG AGGACACCGA GGCCGCCGTC GGCATCGAAT TGTCGGTCGG CAAGATCCGC TTCACGCTCG GCGACGTGGT GCTGACCTCG AAATTGATCG ACGGCACCTT CCCGGATTAC GGCCGGGTGA TCCCGCAGAA CAACGACAAG GAACTGGTCG TCGACAAGAA GGACTTTGAG GCCGCGGTGG ACCGCGTCTC GACCATCTCT TCAGAACGCG GCCGCGCGGT GAAGCTGGCC TTGAGTGCGG GCAAGCTGGT GTTGTCGGTG ACCAATCCGG ATTCCGGCAG CGCCACCGAA GAGCTCGAGG TCGAATACGC CTCCGACGCG CTCGATATCG GTTTCAACTC GCGCTACCTT TTGGACATCG CCGCCCAGAT CGAAGGCGAA GTCGCGGTGC TGAAGCTCGC CGATCCCGGC TCGCCGACGC TGGTGCAGGA CCGCGACGCC AAGGGCGCGC TCTACGTGCT GATGCCGATG CGGGTGTAA
|
Protein sequence | MKVTVERAQL LKSLGHVHRV VERRNTIPIL GNVLLRAEKG RLSLKATDLD LEVTETLPAE TATGGSTTVP AHMFYDIVRK LPDGSQIVLE SDGERAVLAI RAGRSRFTLQ TLPENDFPDL AAGEMTHSFT LTAADVKRLI DRTQFAISTE ETRYYLNGIY LHGAGTAAAA TLRAVATDGH RLAQVDLPLP SGAAGMPGVI VPRKTVGEVQ RLIEDTEAAV GIELSVGKIR FTLGDVVLTS KLIDGTFPDY GRVIPQNNDK ELVVDKKDFE AAVDRVSTIS SERGRAVKLA LSAGKLVLSV TNPDSGSATE ELEVEYASDA LDIGFNSRYL LDIAAQIEGE VAVLKLADPG SPTLVQDRDA KGALYVLMPM RV
|
| |