| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3987 |
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| Symbol | |
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| ID | 3967310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 5020003 |
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| End bp | 5021019 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637923084 |
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| Product | RecF protein |
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| Protein accession | YP_529454 |
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| Protein GI | 90023627 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1262] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.462952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCC GCAATCGCTT TTCTTTATTG TTTGTCAGTG CTTGCTTGGT GTTGAGCGCC
TGTGCGGAGC AGGAGTCTTA CACCTCTTCC ACATCCGACA GAACACAGCA GGTGGCAGGT
ACTGCGTATA GGGCCTGCGA CAATTGCCCG GAAATGATCG TGGTGCCGGC GGGCAGTTTT
CTGATGGGCA GCCCAGCTTC CGAAGAGGGG CGCAGCGAAG CCGAGGGCCC GCAGCTTAAG
GTGACCCTGG CCAAGGTCTT TGCCATGGGC AAACATGAAG TCACGCGTGG CCAATTCAGA
GCATTTGTGG ATGCGACGGG TTACCTCACT CAAGCAGAGG TGGAGGCGGA CAGGGGCTGC
CTTACTCTCG ATGTGCGTGA TGATGGCAAC GGTAATTGGG GCTGGTCGGC GAACCAGAAC
TGGCGCAACG CGACACTTTA TGGGTTGGAG CAGGGCAGCG ACGCGCATCC GGTACTGTGT
GTGAGCCAGC AGGATGCCTT GGCCTACATC ACTTGGTTCA ACGAAACCCA CTTGCCGCCC
GATGAGCGGG CATATCGCCT GCCTACGGAA GCGGAATGGG AGTACGCCGC ACGGGCCGGA
AGCAGCACCA CATACAGCCA TGGCACCGAT GTGACCGCCA TGTGCCGCTA TGGAAATATC
GGCGACCAGA CTGCTCTGCC AAAGGGTCAC GCGTGGCCCG AATGGGTCAC CTGCGATGAT
GGTTATGTGT TCACGGCCCC TGTCGGCAGC TTTCAAGCCA ATGCCTTTGG TTTACACGAT
ATGCACGGCA ATGTCTGGGA GTGGACAGAA GACTGCTGGC ATGACAATTA CATTGACGCA
CCGGTGAACG GAGAGGCGTG GGAGGAAGAA AATGGAGGTG ATTGTGCCAA CCGGGTTGCG
CGCGGGGGTT CCTGGTACTT CCACAGAGGG GATCTGCGTG TCGCTTTCCG TTTTATCAAC
AACCCAGCCA TGCGCTATAG TCTGATGGGT TTTCGGCTTG CACAGGATTT GCCTTAA
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| Protein sequence | MRIRNRFSLL FVSACLVLSA CAEQESYTSS TSDRTQQVAG TAYRACDNCP EMIVVPAGSF
LMGSPASEEG RSEAEGPQLK VTLAKVFAMG KHEVTRGQFR AFVDATGYLT QAEVEADRGC
LTLDVRDDGN GNWGWSANQN WRNATLYGLE QGSDAHPVLC VSQQDALAYI TWFNETHLPP
DERAYRLPTE AEWEYAARAG SSTTYSHGTD VTAMCRYGNI GDQTALPKGH AWPEWVTCDD
GYVFTAPVGS FQANAFGLHD MHGNVWEWTE DCWHDNYIDA PVNGEAWEEE NGGDCANRVA
RGGSWYFHRG DLRVAFRFIN NPAMRYSLMG FRLAQDLP
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