| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3944 |
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| Symbol | |
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| ID | 3967209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4970268 |
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| End bp | 4972370 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637923041 |
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| Product | Serine/threonine protein kinase-like |
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| Protein accession | YP_529411 |
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| Protein GI | 90023584 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.147415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAA TAAGCCAAAA AATATCGTTT AGTATTCGCA ACAAAATATT CTTTTTAGTG
CTTATTGCTT TTAGTGTAAT GATTGTAGCC ATTTCGTGGC AAATTGGTGA GCAAGCGAAG
CGCGTTTCCA CCCAAACTGT GTCTAAATCT TTGGCGCAGT CGAGTGTAAT TTTAAATACT
AAAATTATTA GTCGCTTCGA AACAATTCGC GATGTGGCAA TAGGACTAGC GCGAGATGGG
CGCGTACTGC CATTAGTGTA TGAAAGTGAA TCGGCTACGC TACAAGATTT AAGCTTAGAA
TTTCAGCGTG CATTGGGCTT TAATATTTTA TTTTTCACCG ACGCTAGCGG CACTATTTTA
GCTAGGTCAG ACAGGCCAGA AGCGATAGGT GCAAACTTAG CAGGCAAAGG CGAATTGTTT
GACAAAGCCC TCACTGGCGA AACCAGCACA GGTATTTTTG TAAGCCAGGG TAAGTTAATG
CAAATGGTGG TAGTGCCAGT ATTTGATAAC GTAGCCCAAG ATATCATTCG CGGCACCATC
GCCCTAGCCT ACGAGCTTTC GCAAGAGCTG GCGCAAGAAA TTAACGCACT CACCGCAAGT
GAAGTTGGCT TTTTTGTATT TACCCGCAAC AACCAAAGAG AAATTAACGG GGTATCCAGT
ACTTATAACA CTAACTTAGT GCTGGGCAAT GCTTTGGCAC AAAGGTTAAC CGCAGATAAT
AACCTGTGGC AAAACATTGC CACCGCAGGG GTAAACTTTA AAGAAACGCA ATTAATTATT
GGCGAAGAAG AATACTTGGC GGTAACTCAA ATATTAGGTA ACAGCACCGA CCAGCCCTTA
GGTTTTGTTA TGGTGTTGCG CTCTCGCTCA GAACTAATGC AGCCCTTTGT TGCAATACAA
CGTCGTGTAT TAATAGTGGG CGGCATATGT TTGCTACTGG CTAGTGTGTT GGCTTGGTTG
TTTGCCCTGC GGTTAAGCCG CCCAATAGTG GAGTTGGTAA CCGTTACCAA CAGTATTCGT
GAGGGCCAAT TCGACGCAGC TAGGCGCAAA TCGATAGGCA ACGACGAGGT AGGGTTGCTG
TACGATGCCG TATTCACCAT GGGTAAATCG CTACAGGAGA AAACAGAGCT GGAAGACTAC
CTCGCTTTAG TATCCGATGA GTTAGCGGTT AACGAAAAAA TTAATTTAGA TGCAGAGGCA
GACGGCGAAG TAACGGAGCT GTCTGAACAA GCACCAGTGC TAACCGCAAA AAAATCAAAG
CCGCCCTTAC AAAATATTAT TGTTGATGAG CGCTACAAAA TTATTGAAAA ACTGGGTGCG
GGCGCGATGG GCACAGTGTT TTTAGCGTTA GATATAGAGC TAGATGAAAA AGTTGCCATC
AAAATGATGC CAAAATCATT AATTGATCAG CACACGGGTA TTAATTACAA AGAAGAAATT
CGCTTAGCGC GGCAAATCAC TCACCGAAAT ATTTTAAGAA TTTTCGATTT TGGTGCCTGG
AAGAACTATT ACTACATCAC TATGGAGTTT ATTTCTGGCT ACGATTTGAG TGATTTACTA
AGAATAAAAG GCGCGTTCGA AAGTAATGTG GGTGTAGTTA TGGCCAAGCA AATTTGTTCG
GCTATGAATG CCGCGCATGA GCAAGGCATT ATCCACCGCG ATTTAAAACC AACCAATATG
ATTATAAATC GCCAAGGTGT GTTAAAAATA ATGGATTTTG GTTTGGCGAT GAAGGTGGGT
AAGCAAGATA GCGGTGAACC GAGTAAGGGC AATACCGCAG ACACGAAAAC AATGGTAGCA
GGCACACCGC GCTATATGGC GCCAGAACAA TTTACCGATG GCGAGCTGGA TCAACGCACA
GATATTTATG CTATTGGTAT TATCTTATAT GCCATTTTTA ATGGTAAGCC GCCGTTCAAT
AACAAGGGTT ACGAGGCGTT AGCGAAACAG CACTTTAATA GCCCTGTCCC AGAAATGGAA
GGTAAAGGAG CGCAGCTTTC TGGTGGTTTG CGAGCAATTA TTCACAAGTG TTTAGCTAAA
CAACCAGAAA CACGCTATCA AACAGTACGC GAGATTCTTG ATGACTTAGC GATACTGGCC
TAA
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| Protein sequence | MSRISQKISF SIRNKIFFLV LIAFSVMIVA ISWQIGEQAK RVSTQTVSKS LAQSSVILNT
KIISRFETIR DVAIGLARDG RVLPLVYESE SATLQDLSLE FQRALGFNIL FFTDASGTIL
ARSDRPEAIG ANLAGKGELF DKALTGETST GIFVSQGKLM QMVVVPVFDN VAQDIIRGTI
ALAYELSQEL AQEINALTAS EVGFFVFTRN NQREINGVSS TYNTNLVLGN ALAQRLTADN
NLWQNIATAG VNFKETQLII GEEEYLAVTQ ILGNSTDQPL GFVMVLRSRS ELMQPFVAIQ
RRVLIVGGIC LLLASVLAWL FALRLSRPIV ELVTVTNSIR EGQFDAARRK SIGNDEVGLL
YDAVFTMGKS LQEKTELEDY LALVSDELAV NEKINLDAEA DGEVTELSEQ APVLTAKKSK
PPLQNIIVDE RYKIIEKLGA GAMGTVFLAL DIELDEKVAI KMMPKSLIDQ HTGINYKEEI
RLARQITHRN ILRIFDFGAW KNYYYITMEF ISGYDLSDLL RIKGAFESNV GVVMAKQICS
AMNAAHEQGI IHRDLKPTNM IINRQGVLKI MDFGLAMKVG KQDSGEPSKG NTADTKTMVA
GTPRYMAPEQ FTDGELDQRT DIYAIGIILY AIFNGKPPFN NKGYEALAKQ HFNSPVPEME
GKGAQLSGGL RAIIHKCLAK QPETRYQTVR EILDDLAILA
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