Gene Sde_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3884 
Symbol 
ID3967109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4901657 
End bp4902820 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content52% 
IMG OID637922981 
Productchromate resistance protein-related protein 
Protein accessionYP_529351 
Protein GI90023524 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.849699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAG GTTTCGAGGT ATTTTGGCGC TTCTTATTGT TGGGCTTTGT AAGCTTTGGC 
GGCCCAGCGG CGCATATAGG TTATTTTCGC AACGCGTTTG TAGAAAAGCG CCAATGGTTA
ACCGAAGAAG CCTTTGCCCG TCTGTTGGCT CTTAGTCAAT TTTTGCCCGG CCCAGGGTCG
AGCCAATTGG GGTTTGCCAT AGGCCTACAG CGCGCGGGGC TAGCTGGTGG CATAGCGGCG
TTTTTGGGTT TTACTCTGCC CTCTTTCTTG CTGATGTATT TTATTGCCGC AATAAATGTG
GATGAGCACA CTCAAGGTGA GCTTGGCGCA ACCGTGCGCG CAGTGTTACA GGGTTTAAAG
TTGCTGGCGG TGGTTGTTGT GGCCGATGCG GCATTGAGTA TGTTTAAAAC CTTTTGCACA
ACTCGCCTTG CCGTGGCCAT AGCGCTGGCG ACGGCTATTG CTTTATTAAT GGCGCCAACG
TTATGGATGC AAATGGCAGT GCTAATTACC GCCGCATTGG TGGGGTGTGT TTGGGGCAAG
CCCGCGCCGC AACCGGCAGC GCCAAGCAGT GGTTTTAAGT TATTGCCACT AAGTTTATTC
GCCATGTTGT TTATTGGTTT GCCTATTGCG GCTACGCAGT TTAGCCAAAT ACAGTTTTTT
GCCGAGTTTT ATAAAGCCGG TAGTTTGGTG TTTGGCGGTG GGCATGTGGT GCTGCCGTTA
TTACAGCAAA CCGTGGGCAG CGCCATATCG CCAGATCAAT TTTTAACAGG CTACGCCGCC
GCGCAAGCTG TGCCCGGCCC AATGTTTACC TTCGCCACCT TCCTAGGCGC CGAGCTGGCG
GTACTTTCTT CGCTTAGCCC TATTCAAGGC GCATTACTGG CCACGTTGGC TATATTTTTA
CCCGGCTTTT TACTGGTGCT TGGCCTGCAG GGGGCGTGGC AAAACGTGGC AAATAAACCC
AAAATTGCTG GCGCCGCGTG GGGTATAAAC GCCGCTGTGG TAGGCCTGCT TATTGCCGCA
CTCTACAACC CCGTATTTAT AAGCGCCGTT TTTTCACCCA AAGATATGGC CATGGTACTA
GCTGGCTTAT TTGCCCTGCG CGTAATGCGG GTACCTATTG TTTATTTGGT GGTGGGCTTT
GGTGTGGTGC GTATTTGGTT GTAG
 
Protein sequence
MKQGFEVFWR FLLLGFVSFG GPAAHIGYFR NAFVEKRQWL TEEAFARLLA LSQFLPGPGS 
SQLGFAIGLQ RAGLAGGIAA FLGFTLPSFL LMYFIAAINV DEHTQGELGA TVRAVLQGLK
LLAVVVVADA ALSMFKTFCT TRLAVAIALA TAIALLMAPT LWMQMAVLIT AALVGCVWGK
PAPQPAAPSS GFKLLPLSLF AMLFIGLPIA ATQFSQIQFF AEFYKAGSLV FGGGHVVLPL
LQQTVGSAIS PDQFLTGYAA AQAVPGPMFT FATFLGAELA VLSSLSPIQG ALLATLAIFL
PGFLLVLGLQ GAWQNVANKP KIAGAAWGIN AAVVGLLIAA LYNPVFISAV FSPKDMAMVL
AGLFALRVMR VPIVYLVVGF GVVRIWL