| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3858 |
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| Symbol | |
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| ID | 3967007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4862147 |
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| End bp | 4863328 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922955 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_529325 |
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| Protein GI | 90023498 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTT TGCAACTTTC TATATACGCC ATGGCTTTGG GGTTGTGTGC CTTTACTGGG
CTGCTTGCTT GGCGGGCGTC GTTTCGCAAT AGGTACTTTT TAGTATTTAT GACCCTACTG
GTGTTAATGC TAGGTTGCGA TTGGTTAATG CACCACCCTA GTACACCGCT TAAGAATTTA
TGGCTTGTTA TTTTAATGGC GAGTGCACTA TTGGTTGGCC CATGCGCGTT GCTATTAGCT
AATTCTGTAG GCAATGCGGA TTTGCACATT AATTGGCGCA GTCACGCAGT GTTGGTTATT
GCGGCTTGGT TACTGTTAAC GCCGCTGGCA ACGTCTATTC ACTTCGGCAC CGAATTCGTC
AATGCAGCTG CCCCTGTAAC CAAGGCGTAT GCTTTTTTTA TTCACACTGG TATGTCGCTT
ACGGTTGGTT TGTTTTTATT GCAAACCCTG TGGGTGCTGC GCACTTGCTA TGCCTTGCTG
CAGCGGCGCA ATGTACAAAA CAAGTGGCTG TTTTCTGAGT TAGCCGACCC CGGCCTAAAT
TTGTTGCGCA TTTTAGTGTT GGCCATTGTT ATTAATGCTG TGGTTTCTAT AGCAAAGGTG
CTTTATTGCG CCCTGTTAGA TGGGGTGTAT ATGCCCATTA ATATTGTTAT ATCTGGTATT
CATTTATTAA TGGCCATATT TTTGGCCAGC TCTTATATTA GTTTGGTTGT TGGGGCACAA
GGTAAGGCAG AAGCAATAAG GCAAACACTA TTTAAGCCAG AGGCACATCC AACCACACAA
AGTGATACCA CGGCCAGTAA AAATTTTGAG CCAAGCAGTA ATAGCAATAA CAAAACTACT
GCCGAACTTA CCGGAAAGCA GCAAGCGCTG CTAAAACAAA TTAAAGCGGC AATGGATGTA
GAGCATTTGT ATAAAAAACC CAGCTTAAGC CTACGCGATT TATGCGACCA CCTAAACGAA
AGCCCCCACA ATATATCGCA GGTAATTAAC GAAAGTGATT TAGGTAATTT TTACGATATG
GTGAATAGCC GCAGGGTGGC GCTGGCATCC CAGCTTTTAC AACAAAACCC ACAACGCACG
GTGTTGGATA TTGCTTTCGA TTGCGGGTTT AATTCTAAGT CTTCTTTTAA TAGCGTGTTT
AAGCGGTATA CGGGGGTAAC GCCTAGTCAG TACCGCGCTT GA
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| Protein sequence | MNTLQLSIYA MALGLCAFTG LLAWRASFRN RYFLVFMTLL VLMLGCDWLM HHPSTPLKNL
WLVILMASAL LVGPCALLLA NSVGNADLHI NWRSHAVLVI AAWLLLTPLA TSIHFGTEFV
NAAAPVTKAY AFFIHTGMSL TVGLFLLQTL WVLRTCYALL QRRNVQNKWL FSELADPGLN
LLRILVLAIV INAVVSIAKV LYCALLDGVY MPINIVISGI HLLMAIFLAS SYISLVVGAQ
GKAEAIRQTL FKPEAHPTTQ SDTTASKNFE PSSNSNNKTT AELTGKQQAL LKQIKAAMDV
EHLYKKPSLS LRDLCDHLNE SPHNISQVIN ESDLGNFYDM VNSRRVALAS QLLQQNPQRT
VLDIAFDCGF NSKSSFNSVF KRYTGVTPSQ YRA
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