| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3839 |
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| Symbol | |
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| ID | 3966988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4838740 |
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| End bp | 4840044 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922936 |
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| Product | two-component sensor PhoR |
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| Protein accession | YP_529306 |
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| Protein GI | 90023479 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000175105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGCA GAGGTTTTGC CGTAGAGCTG CGCTGGTTTG TACTGTCTAT GGCAGCCGCA
GCCATAGTTG GCGTAGCAGT AGGCTATTTT TTGGCAGTAA TGTGCTTAGC ACTGCTGCTG
TACGTGTGCT GGTTGTTTTA CAACATCACC CGCTTAGAAG CTTGGATAAT TGCAGCACGC
CGCAAAACCA ACCCGCGCAA CGAGCTATAT GGCATTTTTG GTGAAATAGC CGAAGACGTA
GTGCTGCTGC GCAAACGCTA CCAAAAAGAA AAGCTGCGTT TACAAGCGGT GGTTAGCCGA
GTACAAGATA TGACCTCGGC ACTAACCGAC GGCGTGGTGC TACTAGATTC GCTTGGTAAT
ATTGAATGGT GGAACGAAGC CGCCAAGCAA ATGTTCGACC TGCGCGATGT AGATCACGGC
CACAAATTAA CCAACATTAT TCGCCACCCG CGTTTCGTAA AATACTTCGA AAACGGCAAA
TACGGCGACC CACTTGAGCT AGAAGGCATC CGCCACCCAG ACCAACACCT GCAATTTCAA
ATACACCCCT TTGGCCAAGG TGAACGCCTT GTGGTGCTGC GCGACGTAAC GCGCGTTTAT
AAACTCGAAC AAATGCGCAA AGACTTTGTG GCCAACGTAT CCCACGAGTT GCGTACACCC
CTTACAGTGG TGCGTGGCTA CATCGAAACA CTGTCCGATG CGCCCAGCAT ACCGCCCGCG
TGGGCACGCG CTCTAACCGC CATGCAGGGC CAATGTCAGC GCATGACCGC GCTTATCAAC
GACCTAATTA CCCTAACCAA GCTAGAAACC GATGAGCGTG AAATACGGCA GGAAGCCGTC
GACATAGGGC CACTTATTCA AACCATAATG AGCGATGCCC AAGCATTAAA TGGCGAAAGC
ACGCACACGC TTATTCATAA AGGCGACGAT AATTTGGTAT TGCGCGGCAA CGAGAAAGAG
CTTCGCAGCG CCGTCTCTAA CCTTGTGTTT AACGCTATGA AGTACTCGCC CGACGGCTGC
AAAATTGAAG TGCAATACAC CGCCAACGAG CACGATGTAG TTATTAGCGT AAGTGATACT
GGCGTGGGCA TAGACCCCAA ACACCTACCG CGCCTAACCG AACGTTTTTA CCGCGTAGAC
GGCGGCCGCG CCACCACCAT GGGCGGCACA GGCCTTGGCT TAGCCATTGT TAAACACGTG
CTGTTGCGCC ACGATGCCCA ATTGCGCATT AGCAGTAAAG TGGGCAAAGG CAGCACCTTT
AGCTGCCACT TCCCCAAAGC TCGTTTAATT AAGCGCGCAA AATAA
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| Protein sequence | MIRRGFAVEL RWFVLSMAAA AIVGVAVGYF LAVMCLALLL YVCWLFYNIT RLEAWIIAAR
RKTNPRNELY GIFGEIAEDV VLLRKRYQKE KLRLQAVVSR VQDMTSALTD GVVLLDSLGN
IEWWNEAAKQ MFDLRDVDHG HKLTNIIRHP RFVKYFENGK YGDPLELEGI RHPDQHLQFQ
IHPFGQGERL VVLRDVTRVY KLEQMRKDFV ANVSHELRTP LTVVRGYIET LSDAPSIPPA
WARALTAMQG QCQRMTALIN DLITLTKLET DEREIRQEAV DIGPLIQTIM SDAQALNGES
THTLIHKGDD NLVLRGNEKE LRSAVSNLVF NAMKYSPDGC KIEVQYTANE HDVVISVSDT
GVGIDPKHLP RLTERFYRVD GGRATTMGGT GLGLAIVKHV LLRHDAQLRI SSKVGKGSTF
SCHFPKARLI KRAK
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