Gene Sde_3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3802 
Symbol 
ID3966876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4802631 
End bp4803656 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content44% 
IMG OID637922899 
Productglucosyltransferase 
Protein accessionYP_529269 
Protein GI90023442 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA CAATTAACAA GCCTATATTT TCAGTGGTTA TGCCTATGTA TAACGTTGCA 
AAGTATGTGG CAACGGCCAT TGAATCGGTA CTTGCGCAAA CCTATGGTCA ATTTGAGTTA
ATTTGCGTAG ATGATGGCTG CACCGATAAT ACGTTAGATA TCGTTAGCAC CTATAAAGAT
CCCCGTATAC GTGTTATACG TCAAAAAAAT ATGGGGCTTT CTGCGGCGCG CAATACCGGC
ATCAGCCATG CTCGCGGTTT ATATGTAGCG CTACTCGATT CCGACGATTA CTGGGCTCCC
ACTAAGTTAC AAATGCATTT AAGCCATTTT AGAAACAACC CAAAACTTGG CGTAAGCTAT
AGCGCATCGC AATTTATTGA TGAAGAGGGC AGCCTGCTAG GCATTGGCCA GTACCCCAAG
TTAAAAAATA TTCACGCACA AGATATATTT TGCAGAAACC CAATAGGTAA TGGCTCTGCT
GCGGTACTAA GAAAAAGTAT GCTCTTGCAA ATGGGCAAGC ACGTATACAA CAACGGTGAA
GTGCGCCTCA CTTATTTTGA CGAGCGCTTA AGGCAATCGG AAGATGTGGA GTTTTGGTTA
AGAGCGGCAC TAACAAGCGA TTGGCAGTTT ATGGGTATTG GCGAAGGGTT AACCTTCTAT
CGCGTTAACG CCAGTGGCTT ATCGGCTAAC TTAACCAATC AATACCAAGC TTGGCGAGTA
TCTGTAAAAA ACAACTACCA TTTAAACCCA GCATTTTTTG ATACATGGTA TTCAATGGCC
TCTGCATATC AAAAACGCTA TTTAGCAAGA CGAGCCGTGC AATCTCGCAA CAGCTTCGCT
GCATTAAAGT TTTCGGTTGG CGCTATACTC ACCAACTGGC GAATAGTACG CGACGAACCC
TCTCGCACCT TAGCAACCTT GGGCGCTGCG CTACTTTCTA TTTTACCTAG TAGTATTTAC
AACCCGCTAG AACAATGCGT AATGCAGCTC ACTAAAGCTG TGCAACAACG TAGCCTCCCG
ATTTAG
 
Protein sequence
MNNTINKPIF SVVMPMYNVA KYVATAIESV LAQTYGQFEL ICVDDGCTDN TLDIVSTYKD 
PRIRVIRQKN MGLSAARNTG ISHARGLYVA LLDSDDYWAP TKLQMHLSHF RNNPKLGVSY
SASQFIDEEG SLLGIGQYPK LKNIHAQDIF CRNPIGNGSA AVLRKSMLLQ MGKHVYNNGE
VRLTYFDERL RQSEDVEFWL RAALTSDWQF MGIGEGLTFY RVNASGLSAN LTNQYQAWRV
SVKNNYHLNP AFFDTWYSMA SAYQKRYLAR RAVQSRNSFA ALKFSVGAIL TNWRIVRDEP
SRTLATLGAA LLSILPSSIY NPLEQCVMQL TKAVQQRSLP I