| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3798 |
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| Symbol | |
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| ID | 3966872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4797422 |
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| End bp | 4798684 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922895 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_529265 |
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| Protein GI | 90023438 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCC TCTCTCTACA AAGACAAAAA TTTTATCCTT TTTCTGTAGT GTTAGTAGAC
AAAATACTTG CTCTCACAGT GTTGGCATTG TTACTTCCCG TTCATGCTTT GAACACTCTA
CTGGCTATTT TTCAACGAAA GGCATTTACA CGCAGCGAAT TAAAACAAGA TGCCCTCGGC
CGCGTTGTGG AACTTACACG TTGGAACGTA GGCTTGCTGC GTGAAAGTTT ACATTTGCTA
AATGTTGTTA AAAACGAAAT AAGCCTTGCG GGCGTAAGCC TTAAATATGT GTGTATAGAA
GAGGATATAC TCACTCTTAC GCCGCTTAAG CCAGGTTTGT TTAGCATATA CGAAATTCAA
CACACCATTG GCCGTATAGA TTGCAGTCAC GGTGATACTC TACGCCAACA TGAGAGAAAT
ATAACAGTGC GTTTTCAGTT GGCGATTGTT ATTAAGGCGA TAGTATGCCG TGTACTTTAC
CAATCAAATA AAGCGCGTGA AGCGAGTCGC TTTAATGTAC TGGGTGTGCA TGTAGATAAT
TGGTTACTCG CCGACGTGCT TAATTGGATT TTTACCGATA CCAATATTGA TACAAATACT
AATACCAATA TAAATGCCAA GGGCAACTGT CGCAGCGGAT ATTTTATCAA TGTAAATTCT
ATTAACTTGG CATATAGCGA TGGCGATTTT AAAAAGGTGT TAGCCAGCGC AGATTGCGCA
TTGGCCGACG GGTCTGGCGT GCGCTTGGGC GCAAAACGAC TTGGGGTGCA GTTGCGCGAT
AATGTAAATG GCACAGATTT ATTACCGCAT ATTTGTCGCA GAGCAATCGC AGAAGGGTGG
TCGATCTATT TACTTGGCAG TGAAAAAGGT GTGGCAGCGG CAACCGCCAA AAATTTAAAG
GCAACCTTTA CAGGGTTGCG CATTGCTGGT ACTCATCACG GGTTTGTTAG TGAGCAAGAT
GACGAGCTGC TAGTGCAACA AATTAATCAG TCGGGTGCAG ATATAGTTTT AGTGGCAATG
GGTTCGCCCA TGCAAGAAAA ATGGATAGCG AGAAACAAGG TGAACTTGCA GGCATCAACG
GCGCTCGCGG TTGGCGGCCT ATTTGATTTT TATTCCGGTA AAATCCCTCG GGCGCCGGTG
TGGATGCGAG AGTTGGGTAT GGAGTGGATA TACCGCTTGG CTATGGAGCC AAAGGCGAAA
TTTAATCGCT ATGTAATAGG TAACCCTCTA TTTATGTGGC GTATAATGAA TGCGAAAACG
TAG
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| Protein sequence | MQILSLQRQK FYPFSVVLVD KILALTVLAL LLPVHALNTL LAIFQRKAFT RSELKQDALG
RVVELTRWNV GLLRESLHLL NVVKNEISLA GVSLKYVCIE EDILTLTPLK PGLFSIYEIQ
HTIGRIDCSH GDTLRQHERN ITVRFQLAIV IKAIVCRVLY QSNKAREASR FNVLGVHVDN
WLLADVLNWI FTDTNIDTNT NTNINAKGNC RSGYFINVNS INLAYSDGDF KKVLASADCA
LADGSGVRLG AKRLGVQLRD NVNGTDLLPH ICRRAIAEGW SIYLLGSEKG VAAATAKNLK
ATFTGLRIAG THHGFVSEQD DELLVQQINQ SGADIVLVAM GSPMQEKWIA RNKVNLQAST
ALAVGGLFDF YSGKIPRAPV WMRELGMEWI YRLAMEPKAK FNRYVIGNPL FMWRIMNAKT
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